Rhodoferax antarcticus: RA876_15490
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Entry
RA876_15490 CDS
T04655
Name
(GenBank) glycogen debranching enzyme GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
rac
Rhodoferax antarcticus
Pathway
rac00500
Starch and sucrose metabolism
rac01100
Metabolic pathways
rac01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rac00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
RA876_15490
Enzymes [BR:
rac01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
RA876_15490
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
GlgX_C
Motif
Other DBs
NCBI-ProteinID:
APW47527
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Position
3199774..3201885
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AA seq
703 aa
AA seq
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MDRLNIASTQLGQPWPLGAHFDGQGINFAVFSAHAQAMDLCLFDSQGTQELARLRLRGRT
GDVWHGYLPNAQPGLVYGLRASGPWRPDRGHRFDASKLLLDPYARDIVGDFIWCDEHFAP
DRMHPRHLDTRDNAPTALKARVVHDTFDWNGDRPPSIALSKTVIYECHVKGFTKTHPDIP
PGIRGTFAGLGHPAAISHLKTLGITAVSLLPVHYHLSEQRLVDMGLSNYWGYNTLGFFAL
NPHLASQHSGISPREEFRTMVRALHAAGLEVILDVVYNHTAEADHTGPTLSFRGLDNASY
YRLVPNDLSHYENYSGCGNTMDIRQPRVLQLVMDSLRYWVNEMHVDGFRFDLATVLGRTD
SGFSPQAPFFAAVAQDPVLCRVKMIAEPWDIGPGGYQVGQFPRGWLCWNDHFRDCLRRFW
VQSVASPLAVGSGGTLGEFAMRLCGSSDLYQARRREPAESVNYIISHDGFTLLDLLSYNH
RHNLANGENNRDGQGNNLNFNCGFEGPSSDPTVNQLRQLLQRALLACNLLAQGTPMICAG
DELGHTQAGNNNPYCQDNASTWIDWSEVDTDLLAFTGHVIGLRHRLQPFANLWYSGIADA
DGIYDLSWWNADGSVLQGSAWQLPQRRALGCLIGKPGHSSSPLLLLVNNAPHTEHFMVPH
GHWQGLLDTSHPLGLADWQGAKGFELPIAAHSLLLLQQTVTRT
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcctgaacatcgcctccacacagttggggcagccttggccattgggtgcccat
ttcgatggccaaggcatcaactttgccgttttttcagcgcacgcacaggccatggatctg
tgccttttcgacagtcaaggtactcaggaactggcccgcctgcgcctgcgcgggcgcact
ggcgatgtctggcatggttacctgcccaacgcgcagcctgggctggtttacggtctgcgc
gcctctggtccctggcggccagaccgggggcatcggttcgacgcgtcgaagttgctgctg
gacccctatgcccgtgacatcgtgggcgatttcatatggtgtgacgagcattttgcgccg
gaccgcatgcacccgcgtcaccttgacacccgggataacgcgcccacggcgctcaaggcg
cgtgtcgttcatgacacttttgattggaatggtgaccgtcctccgtccattgccctgagc
aaaactgtcatctatgagtgccatgtcaaaggcttcaccaaaactcaccccgacattccg
ccggggatccgtggcaccttcgccggtttggggcaccccgctgccatcagtcatctaaag
accttgggcatcacggctgtcagtctgctgcccgtgcactaccacctcagtgagcagcgg
ctggtggatatggggctgagcaactactggggctacaacaccttgggtttcttcgctctg
aacccgcatctggccagccaacacagcggcatctcaccccgggaagaattccgcacgatg
gtgcgcgccttgcacgcagccggattggaggtcattctcgatgtggtttacaaccacacc
gctgaagctgaccacaccgggccgacgctgagctttcgcggtctggacaacgccagttat
taccgcctggtccccaatgatctgagccattacgagaattacagtggctgtggcaacacc
atggatatccgccagccccgggtgttgcaattggtgatggacagtctgcgttactgggtc
aatgagatgcatgtggacgggttccggtttgatctggctaccgttctcggacgcactgac
agcggtttttcaccccaggcaccgttctttgctgcagtggcccaagaccccgttttgtgc
cgcgtcaagatgattgccgaaccttgggacattggccccgggggttaccaggtgggccag
ttcccgcgcggctggctgtgttggaacgaccatttccgcgattgcctgcgacgtttctgg
gtgcaaagtgtcgcctcgccgctcgctgtgggcagtggtggcacgctgggtgagttcgcc
atgcgcttgtgtggctcgtccgacctgtaccaggcgcgcaggcgtgagccagcagagtcg
gtcaactacatcatttcccatgatggattcaccctactggatctgctcagttacaaccat
cggcacaacctggccaatggtgaaaataaccgtgacggtcagggtaacaacctcaatttc
aactgtggttttgaggggcctagcagcgatcccacagtcaaccagttgcgccaactcctg
cagcgtgcgctgctggcctgcaacttgttggcccagggcacgcccatgatctgcgctggc
gacgaactgggtcatacccaggcgggcaacaacaacccctactgccaggacaatgccagc
acttggatcgactggtccgaagtcgataccgacttgctggccttcaccgggcatgtgatc
ggtctgcgccaccgcttgcaaccgtttgccaatctctggtacagcggcattgccgacgct
gacggcatttacgatctgtcatggtggaatgccgacggcagtgtgttgcagggctcagcc
tggcaactgccccagcgccgtgccctgggttgtctgatcggcaaacccggtcattcaagt
tcaccgctgctgttgctggtcaacaatgcgccgcacacggaacatttcatggtgccacac
ggtcattggcagggtctgctggacaccagtcacccattggggctggccgactggcagggc
gcaaagggctttgaactgccgatagccgcacacagtctgctgctgctgcagcagactgtg
acgcgcacctga
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