Rhodoferax antarcticus: RA876_16290
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Entry
RA876_16290 CDS
T04655
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
rac
Rhodoferax antarcticus
Pathway
rac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RA876_16290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rac03400
]
RA876_16290
Enzymes [BR:
rac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
RA876_16290
DNA repair and recombination proteins [BR:
rac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RA876_16290
RecFOR pathway proteins
RA876_16290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
DUF460
Motif
Other DBs
NCBI-ProteinID:
APW47650
LinkDB
All DBs
Position
3354347..3354907
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AA seq
186 aa
AA seq
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MRILGIDPGLRTTGFGVVDVDGSQLIYVASGTISTIHIEKDQLPARLKVLFDGIREVVAR
YEPDCASVEIVFVNVNPQSTLLLGQARGAVITALVSADLPVAEYTALQMKQAVVGYGRAD
KTQIQEMVRRLLALPGLPGPDAADALGLAITHAHAATSMARLAQAKGLGQAQHQTQKAAY
KAGRSR
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgagaattttggggatcgatcctggcctgcgcaccaccggttttggtgtggtggatgtg
gatggctcccagctgatctatgtggccagcggcaccatcagcaccatccacatcgaaaaa
gaccagttaccagcccgcctgaaagtgctgtttgacggcatccgcgaggtggtggcgcgc
tatgagcccgattgcgcctcggtggagatcgtgtttgtcaacgtcaacccgcagtccacg
ctgctgctgggccaggcacgcggcgcggtgatcacagcgctggtgtctgccgacctgccg
gtagctgaatacaccgccttgcagatgaagcaggcggtagtgggctacggccgcgccgac
aaaacccagatccaggagatggtgcgccgcctgctggccctgcccggcttgcctgggcca
gatgcggcggacgccctgggcctggccatcactcacgcgcatgcggccacctcaatggcc
cgcttggcgcaggccaaaggcctgggccaagcgcagcaccagacgcaaaaggcagcctac
aaagctgggcgcagccgctaa
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