Rhodoferax antarcticus: RA876_16350
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Entry
RA876_16350 CDS
T04655
Name
(GenBank) UDP-N-acetylmuramate--L-alanine ligase
KO
K01924
UDP-N-acetylmuramate--alanine ligase [EC:
6.3.2.8
]
Organism
rac
Rhodoferax antarcticus
Pathway
rac00550
Peptidoglycan biosynthesis
rac01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rac00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RA876_16350
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rac01011
]
RA876_16350
Enzymes [BR:
rac01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.8 UDP-N-acetylmuramate---L-alanine ligase
RA876_16350
Peptidoglycan biosynthesis and degradation proteins [BR:
rac01011
]
Precursor biosynthesis
Amino acid ligase
RA876_16350
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase
Mur_ligase_M
Mur_ligase_C
MurD-like_N
HTH_27
Motif
Other DBs
NCBI-ProteinID:
APW47660
LinkDB
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Position
complement(3364621..3366045)
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AA seq
474 aa
AA seq
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MKHAIRHIHFVGIGGVGMSGIAEILFNLGYTISGSDLSDSATLQRLAGLGIQTHIGHAAS
HVAGADAVVTSTAVQADNPEVLAARHSRIPVVPRALMLAELMRLKKGIAIAGTHGKTTTT
SLVASVLAEAGLDPTFVIGGRLTSAGANARLGQGDHIVVEADESDASFLNLLPVMAVVTN
IDADHMETYGHNFENLKKAFVDFLHRMPFYGTAILCTDDAAVRSIVPQVTCPITSYGFEE
GAEVRAVDVRALDGQMLFTVQRRNGMVLADLAVVLNLPGRHNVLNALSAIAVALELSVSD
DAVLRALAGFKGVGRRFQNYGELPAATGGSFTLVDDYGHHPIEMAATLAAARGAFPGRRL
LLAFQPHRFTRTRDCFDDFVKVIAQADAVLLTEVYAAGETPIVAADGRSLARALRVAGKI
EPVFVDQISDMAQSIVDIAQGGDVVLCMGAGSIGAVSAKVVDLLSKKELLPQET
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaaacacgccattcgccacattcactttgtcggtatcggcggtgtaggcatgtccggc
attgccgagatcttgttcaatctgggctacaccatctccggctctgacctgtctgacagc
gccacgctgcagcgcttggcgggcctgggcatccagacgcacattggtcacgcggccagc
catgtggctggcgccgatgcggtggtcacctcgaccgcggtgcaggcggataaccccgag
gtgctggcggcacgccacagccgcattccagtggtgccgcgcgcgctgatgctggccgag
ctgatgcgcctgaaaaaaggcattgccattgccggtacccacggcaagaccaccaccacc
agtctggtcgccagtgtgttggccgaggccgggctggacccgacttttgtcattggcggg
cggctcaccagcgccggtgctaatgcccgtctggggcagggtgaccacatcgtggtggag
gctgacgagtctgatgcgtcgttcctgaacctattaccggtgatggcggtagtgacgaat
atcgacgccgaccacatggaaacctatggccataactttgagaacctgaagaaagcgttt
gtcgacttcctgcaccgcatgccgttttacggcaccgccattctgtgcaccgacgatgcg
gcggtgcgctccatcgtgccgcaagtcacctgcccgatcaccagttacggctttgaagaa
ggtgcggaagtgcgcgcggtggacgtgcgcgcgctggatggtcagatgctgtttaccgtg
caacggcgcaacggcatggtgctggcggatctggccgtggtgttgaatctgccgggccgg
cataacgttcttaacgcgctctcagccatcgccgtagcgctggagctgagcgtgtccgac
gatgcggtgctgcgtgccctggccggtttcaaaggcgtcgggaggcgctttcagaattac
ggcgagctgcccgcagccactggcggcagcttcacgctggtggacgactatggccaccac
cccatcgagatggccgccaccctggcagcggcacgcggcgctttccctggcaggcggctg
ttgctggcctttcagccgcaccgtttcacccgcacccgcgactgttttgacgactttgtg
aaagtcatcgcccaggccgacgcggtgctgctaaccgaggtgtatgccgctggtgagacg
cccatcgtggcggcagatggccgcagtttggcgcgtgcgctacgcgtggccggcaagatc
gaaccggtgtttgtcgatcagatttccgacatggcgcaaagcatcgtcgacatcgcccaa
ggtggtgatgtggtgctgtgtatgggcgcgggctcgattggtgcggtgagtgccaaggtg
gttgatttgctctctaaaaaagagctactaccgcaggagacataa
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