Rhodoferax antarcticus: RA876_16375
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Entry
RA876_16375 CDS
T04655
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
rac
Rhodoferax antarcticus
Pathway
rac00300
Lysine biosynthesis
rac00550
Peptidoglycan biosynthesis
rac01100
Metabolic pathways
rac01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rac00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RA876_16375
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RA876_16375
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RA876_16375
Enzymes [BR:
rac01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
RA876_16375
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Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
APW48508
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Position
complement(3371416..3372840)
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AA seq
474 aa
AA seq
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MTLAQVATWLGQAQPVGLDAAAPVAIARVHTDTRTLQPGDLFVALRGERFDANAFLVEAR
AKGAVAALCQGDKAAAQLAQAGLPGLVVADARLALAQLATHYRAQFSLPLIAVTGSNGKT
TVTQMIAAILHAAQGDAALATQGNLNNDIGVPLTVARLTSEHRTAVVELGMNHPGEIATL
AAIAQPTVALVNNAQREHLEFMHTVQGVAEENGAVISALPADGVAVFPADDAYSAVWVEL
AGARRVLRFAAQAPADAKADAEVYALQTHWQDAAWQVCAATPVGELRYSLHIAGAHNVKN
SLAAVACALAAGVASEAITAGLSAFEPVKGRSRALQVSLSGRSITVVDDTYNANPDSVRA
AIDVLAALPGPCLLVLGDMGEVGDQGPLFHAEALTHALEKNIEKVLVTGVQSAQAAMKFD
DVRVCVEMIDLQAAVLAALPGVSSVLVKGSRFMKMERVVEAIVAATQESRAAAC
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaccttggcgcaagtcgccacctggctgggccaggcgcagccggttgggctggatgca
gcggcgccggtggctatagcgcgcgtgcacaccgacacccgtaccctgcagcccggtgat
ttgttcgtggccttgcgcggtgagcgctttgacgccaatgcgtttctggtagaggcccgg
gccaaaggcgcagtggcggccttgtgccagggtgacaaggctgcggcgcaactggcgcaa
gcaggcttgccggggctggtggtggccgatgcgcggctggcactggcgcaactggccacc
cactaccgcgcgcagttcagcttgccgctgatcgcggtgaccggcagcaacggcaaaacc
acggtgacgcaaatgatcgccgccatcctgcacgccgcgcaaggtgatgccgctttggcc
acacagggcaatttgaacaatgacattggcgtgccgctcactgtggcgcgcctcacatct
gagcaccgcaccgctgtggtcgagctcggcatgaaccaccccggcgaaatcgccaccttg
gcggccattgcccagcccacggtggcgctggtcaacaacgcccagcgagaacatcttgaa
ttcatgcacaccgtgcagggcgtggccgaagaaaatggcgcggtgatcagtgccctgcct
gctgacggtgtggcggtgttcccggccgacgacgcctacagtgccgtctgggttgaactg
gccggtgcgcgccgggtgctgcggtttgcagcgcaggcgccagccgatgcaaaggccgat
gccgaggtgtatgccctgcagacccactggcaagacgccgcttggcaggtgtgtgccgcc
accccggtgggtgagttgcgctacagcctgcacattgccggtgcccacaacgtgaagaat
tcgctggctgccgtggcctgtgcattggcggctggtgttgcttctgaagccatcaccgcc
ggactgtctgcttttgagccggtaaaaggccgcagccgggcactgcaggtcagcttgtcg
gggcgcagcatcaccgtggtggatgacacctacaacgccaacccggattcagtgcgcgcc
gccattgacgtgctggcggcgttgccggggccgtgtttgctggtgctgggtgacatgggt
gaagtcggcgaccaaggcccgctgttccacgccgaggcgctgacccacgctttggaaaaa
aatatagaaaaagtgcttgtaaccggcgtgcagtcagcgcaagcagctatgaaatttgat
gatgtgagggtttgtgtggagatgattgatttacaggcagccgtattggctgcgttgccc
ggagtgtccagcgtgttggtcaagggctcgcgcttcatgaagatggagcgggtggtcgag
gccatcgtggccgccacgcaagaaagcagggcagcggcatgctga
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