Rahnella aceris ZF458: JHW33_00960
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Entry
JHW33_00960 CDS
T07163
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
race
Rahnella aceris ZF458
Brite
KEGG Orthology (KO) [BR:
race00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
race03032
]
JHW33_00960 (gyrA)
03400 DNA repair and recombination proteins [BR:
race03400
]
JHW33_00960 (gyrA)
Enzymes [BR:
race01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
JHW33_00960 (gyrA)
DNA replication proteins [BR:
race03032
]
Prokaryotic type
DNA Topoisomerases
JHW33_00960 (gyrA)
DNA repair and recombination proteins [BR:
race03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JHW33_00960 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QQN35249
LinkDB
All DBs
Position
196781..199432
Genome browser
AA seq
883 aa
AA seq
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MSDLAREITPINIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN
KAYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEIRMSKIAHELLADLEKETVDFVPNYDGTEQIPSVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLTEVINGCLAYIEDENISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI
YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG
MRIVIEIKRDAVGEVVLNNLYSLTQLQTSFGINMVALHQGQPKILGLKEILSAFVRHRRE
VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRAAPTPAEAKAGLVARSWDLGNV
SAMLASAGDDAARPEWLEPQFGIHDGKYFLTEQQAQAILDLRLQKLTGLEHEKLLDEYKE
LLVQIAELLFILSNPDRLMEVIREELEAIRDQYNDPRRTEITANTSDINIEDLINQEDVV
VTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILMFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEPNERITAILPVREYEEGRHVFMATASGTVKKTAL
TDFSRPRSAGIIAINLNEGDELIGVDLTDGKDEVMLFSAAGKVVRFSEEAVRSMGRTATG
VRGIRLGEGDSVVSLIIPRGDGCILTVTQNGFGKRTESTEYPTKSRATQGVISIKVSERN
GPVIGAIQVDEADQIMMITDAGTLVRTRVSEVSTVGRNTQGVTLIRTADDENVVGLQRVA
EPVEDEELDGVATEAGELEAAQAADLPDDAESEDDQPADDEEE
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgccagagaaatcacaccgattaacatcgaagaagagcttaaaaactct
tatttggattatgcgatgtccgttattgtcggacgtgcgttaccagatgtgcgcgatggt
ttgaaaccggtgcaccgccgcgtacttttcgcaatgaatgtcctcggtaacgactggaat
aaagcctataaaaaatcggcccgtgtggtcggtgacgttatcggtaaatatcacccacac
ggtgataccgcggtttatgacaccatcgttcgtatggctcagcctttctcacttcgctat
atgctggtggacgggcagggtaacttcgggtcagtggatggcgactccgcagcagccatg
cgttataccgaaatccgcatgtcaaaaattgcacacgaattgctggcagatttagaaaaa
gaaactgtcgatttcgtgccaaactatgacggcacagaacaaattccttctgttatgcca
acgcgcattcccaacctgctggttaacggctcctcgggtatcgctgtcggtatggcaacc
aacattccgccgcataacctcaccgaggtgatcaacggctgtctggcgtatattgaagat
gaaaacatcagcattgaagggctgatggaacacatcccggggccagacttcccgacggct
gcgatcatcaacggtcgccgtggtatcgaagaagcttaccgtaccggccgtggcaaaatt
tatatccgtgcccgtgctgaagtagaagccgatgcgaaaactggtcgcgaaaccatcatt
gttcacgagatcccgtatcaggtgaacaaagcccgtctgatcgaaaagatcgccgagctg
gtgaaagaaaaacgcgtcgaaggtatcagtgcgctgcgcgatgagtctgataaagacggc
atgcgtatcgtgattgaaattaaacgcgatgctgtcggtgaagtggttctgaacaacctg
tattccctgacgcaactgcagacgtctttcggcatcaacatggtggcactgcaccagggt
cagccgaagattctcggtctgaaagaaattctgtcagcgttcgtccgccaccgccgtgaa
gtggtgacgcgtcgtaccattttcgaactgcgtaaagcccgcgaccgtgctcatatcctc
gaagcactggctatcgcgctggcgaacatcgacccgatcattgaactgatccgtgcggca
cccacgccggctgaagcgaaagctggcctggtcgcgcgttcatgggatctgggcaacgtg
tcagcaatgctggcaagtgcgggtgacgatgcagcccgtcctgaatggctggagccgcag
tttggtattcatgatggaaagtacttcctgactgagcaacaagcccaggccattctggat
ctgcgtctgcagaaactgaccggtcttgagcacgaaaaactgctggatgaatacaaagag
ctgctggtgcaaatcgctgagctgctgttcatcctgtccaaccctgaccgtctgatggaa
gtcattcgtgaagaactggaagcgatccgtgatcaatacaacgatccgcgtcgtaccgaa
attacggcaaatacctctgacatcaacatcgaagacctgatcaatcaggaagacgttgtg
gtgaccttgtcgcatcagggctacgtgaaatatcagcctctgactgattacgaagcgcag
cgtcgcggcggtaaagggaagtcagcagcacgcattaaagaagaagactttatcgatcgt
ctgctggtggccaatacccacgacactattctgatgttctcaagtcgcgggcgtctgtac
tggatgaaagtctatcagttgccggaagccagccgcggtgcccgtggccgtcctatcgtc
aacctgttgccgcttgagccgaacgaacgtattaccgccattctgccagtacgcgagtac
gaagaaggtcgtcacgtgttcatggcaaccgccagcggtaccgtgaagaaaactgcgctg
accgatttcagccgtccacgcagcgccggcattatcgccatcaacctcaacgagggtgat
gagctgattggtgttgacctgactgacggtaaagacgaagtcatgctgttctctgcagcc
ggtaaagtcgtgcgcttctctgaagaagccgtccgctcaatgggccgtacggcgacgggg
gttcgcggtatccgtctgggcgaaggcgacagcgttgtatcgcttatcatcccacgcggt
gacggttgtatcctgactgtgacgcagaacggtttcggtaaacgtactgaatcgaccgag
tacccaactaaatctcgcgcaacccagggcgttatctcaatcaaagtgagtgagcgtaac
ggaccggttattggtgcgattcaggttgatgaagcggatcaaatcatgatgatcaccgat
gccggtacgctggtgcgtacccgtgtttccgaagtgagtactgttggccgtaacacccag
ggtgtgacgcttatccgtaccgcagacgatgagaatgtggttggcttgcagcgtgttgca
gaaccggttgaagacgaagaactggatggcgtagccaccgaagcgggcgaactggaagcg
gcacaagcagccgatctgccagacgacgcggaaagtgaagacgatcagccagctgatgac
gaagaagaataa
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