Rahnella aceris ZF458: JHW33_01195
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Entry
JHW33_01195 CDS
T07163
Symbol
nfo
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
race
Rahnella aceris ZF458
Pathway
race03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
race00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JHW33_01195 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
race03400
]
JHW33_01195 (nfo)
Enzymes [BR:
race01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
JHW33_01195 (nfo)
DNA repair and recombination proteins [BR:
race03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
JHW33_01195 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
CFAP58_CC
Motif
Other DBs
NCBI-ProteinID:
QQN35296
LinkDB
All DBs
Position
complement(273482..274348)
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AA seq
288 aa
AA seq
DB search
MKFVGAHVSAAGGVDQAVLRAHELEATAFALFTKNQRQWKAAPLPEDVIEKFKVACEKYG
YQSNQILPHDSYLINLGHPVTEALEKSREAFLDELQRCEQLGLSLLNFHPGSHLMQIEED
KCLALISESLNIALDKTKGVTAVIENTAGQGSNLGFRFEHLAKIIEGVEDKSRVGVCIDT
CHAFAAGYDLRTAEECEKTFKHFEEVVGFQYLRGMHLNDAKSEFNSRVDRHHSLGEGNIG
NTVFSWIMKDARFDGIPMILETVNPDIWKDEIAWLKAQQTAENDEAAA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgtgggagcacacgtgagtgcggccgggggtgtcgatcaggcggttctgagg
gcacacgagctggaagccacggcttttgcgcttttcaccaagaatcagcgtcagtggaaa
gccgcaccgttgccggaagacgtcatcgaaaaattcaaagtggcctgtgaaaaatacggt
taccaaagcaatcagattttgccgcacgacagctacctgatcaaccttggtcatccggtc
accgaagcgctggagaaatcccgcgaggcgtttcttgatgagttgcaacgctgcgaacag
cttggcctgtcgctgctgaatttccatccgggcagccacctgatgcaaatcgaagaagat
aaatgcctggcgctgatttctgaatccctgaacattgcgctggataaaaccaaaggcgtg
accgcggttatcgaaaacaccgccggtcagggcagcaatcttggcttccgcttcgagcac
ctagccaaaattattgaaggcgtggaagacaaaagccgcgttggcgtctgtatcgatacc
tgccatgcctttgctgcaggttatgacctgcgcacggcagaagaatgcgagaaaaccttt
aagcactttgaagaggtggttggttttcaatatctgcgtggtatgcacctcaacgacgcg
aaaagtgagttcaacagccgcgtcgaccgccaccacagccttggcgaaggcaatatcggc
aataccgtatttagctggatcatgaaagacgcgcggttcgacggcatcccgatgatcctc
gaaactgtcaatccggatatctggaaagatgaaatcgcctggctgaaagcgcagcagact
gccgagaatgacgaagccgcggcgtag
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