KEGG   Rahnella aceris ZF458: JHW33_02020
Entry
JHW33_02020       CDS       T07163                                 
Symbol
helD
Name
(GenBank) DNA helicase IV
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
race  Rahnella aceris ZF458
Brite
KEGG Orthology (KO) [BR:race00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:race03400]
    JHW33_02020 (helD)
Enzymes [BR:race01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     JHW33_02020 (helD)
DNA repair and recombination proteins [BR:race03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    JHW33_02020 (helD)
SSDB
Motif
Pfam: Helicase_IV_N UvrD-helicase AAA_19 UvrD_C_2 UvrD_C AAA_12 AAA_30 AAA_11 DEAD
Other DBs
NCBI-ProteinID: QQN35448
LinkDB
Position
474271..476325
AA seq 684 aa
MELKSTSFGKHLAQHPYNRVRLLNAGVEVSGDKHHYLIPFNQLIQIRCKRGIVWGELEFE
LPEQKVVRLHGTEWQETQRFYQYLLNIWQTWSLEMSEVSAGVLRGQVEKITQIEQQDKWF
KRIDLADVQKDITEAFSAIPVPVERLTEFDNCREDYQTCLRWLEQGKRSVDRRNLAWTDR
VIADNRDFFDTVEVSPLNDSQCRAVVNGEDAVLVLAGAGSGKTSVLVARAGWLLRRQEAH
PEQILLLAFGRQAADEMNGRIKERLHTEGIKAKTFHALALQIIQEGSKKAPKISKLETDS
KARRSLLIKTWQQQCAEKKVQASGWRQWMTDELEWTVPEGDYWKNKSLAERLGSRLERWL
SLMRMHGGSQAEMIESAPEDVKDLFTKRIRLMAPLMKAWKTALKEEGAVDFSGLIHQAVN
ILEKGRFVSPWKHILVDEFQDISPQRALLLSALRKLNKHTSLFAVGDDWQAIYRFSGAEL
SLTTAFADNFGEGAQCALDTTYRFNDRIGEIANKFVQQNPYQLKKPLNSLTKGNKKNVVI
LPEDQMEKLLDKLSGYVTADEHILVLARYHHLRPQILEKAATRWPKLNLDFMTIHASKGQ
QAEYVIIVGLHGGNDGFPAPARESLLEEVLLPEPENFLDAEERRLLYVAMTRAKHQVWLL
QDKERPSVFVEQLEDIGVPAQRKP
NT seq 2055 nt   +upstreamnt  +downstreamnt
atggaactgaaatcgacctcattcgggaaacatctggcgcagcacccttataaccgggtg
cgtctgcttaatgccggcgtggaagtcagcggcgataaacatcactatctgatccctttt
aatcagcttattcagattcgctgcaaacgtggcatcgtctggggggagcttgaatttgaa
ttgccggagcaaaaagtggtccggctgcacggcaccgaatggcaggaaacacagcgtttt
tatcaatacttgctcaatatctggcagacctggagtctcgagatgagcgaggtcagcgcc
ggagtattgcgcgggcaggttgaaaaaattacccagattgaacagcaagacaaatggttc
aaacgcattgatctggctgatgtgcagaaagacattactgaggcattttccgcgatcccg
gtgcctgttgaacgtcttactgaatttgataattgtcgggaagattatcagacctgtctg
cgctggcttgagcagggtaaacgcagtgtcgaccggcgcaatctggcttggactgacagg
gtgattgctgataaccgtgacttttttgataccgttgaagtgtcgccgctcaatgacagc
caatgccgcgctgtcgtgaacggtgaagatgcggtgctggtgctggctggcgcgggcagt
ggtaaaacgtcggtgctggtggcgcgcgcgggctggctgttgcgccgtcaggaagcgcat
cctgaacaaattctgttgctggcctttggtcgtcaggcagcggatgaaatgaacgggcgt
atcaaagagcgtttgcatactgaaggcatcaaggccaagacatttcatgcgctcgctttg
cagattatccaggaaggcagcaaaaaagcccccaaaatcagcaaacttgaaaccgattcg
aaagcccggcgcagcttactgattaagacatggcagcagcagtgtgcagagaaaaaagtg
caggccagcggctggcggcaatggatgacagacgaactggaatggaccgttcctgagggt
gattactggaaaaataaatcgctggcggagcgcctcggaagccgccttgaacgctggctc
agcctgatgcgtatgcacggtggcagtcaggcggagatgatcgaaagcgcgccggaagac
gtcaaagatctgtttacaaagcgtattcgtctgatggcaccgctgatgaaagcctggaaa
acggcactgaaagaagagggcgcagtggacttttccgggcttatccatcaggcagtcaat
atcttggaaaaagggcgttttgtcagcccgtggaagcatattctggtggatgaattccag
gacatttccccccagcgcgcactgctgctttctgccttgcgtaaacttaacaaacatacc
agtttgtttgctgtgggggacgactggcaggcgatttaccgtttcagcggtgcggagttg
tccctgaccacggcgtttgctgacaattttggcgaaggagcgcaatgcgcactggatacg
acttaccggttcaatgaccgcatcggtgaaattgccaataagtttgtgcagcaaaaccct
tatcagttgaagaagccgctgaacagtctgaccaaaggcaacaagaaaaatgtggtgata
ctgcctgaggatcagatggaaaaattgctggataaacttagcggctatgtcaccgctgat
gaacatattctggtgctggcacgttatcaccatcttcgaccgcaaattctggagaaagcc
gcgacccgctggccaaagcttaatcttgatttcatgacgattcatgccagtaaaggacaa
caggctgaatacgtgattatcgtcggattgcatggtggcaatgacggtttccctgcgccc
gcgcgggaatctttgctggaggaagtgttattgcctgaaccggaaaactttctggatgcc
gaagagcggcgtttattgtatgtggcgatgacgcgtgcgaagcatcaggtctggttgctg
caggataaagaacgtccttccgtcttcgtagaacagcttgaagatatcggcgtaccggcc
cagcgaaaaccatag

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