Rahnella aceris ZF458: JHW33_02900
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Entry
JHW33_02900 CDS
T07163
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
race
Rahnella aceris ZF458
Pathway
race02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
race00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JHW33_02900
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
race02000
]
JHW33_02900
Transporters [BR:
race02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
JHW33_02900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QQN35610
LinkDB
All DBs
Position
complement(658180..659763)
Genome browser
AA seq
527 aa
AA seq
DB search
MKDNNSPLTKLMQDAQLSRRGFITSVSAVGITSAMGFSPFSAFAAEPKKGGILKLGMSGG
NTSDTLDPTLFSDWVPLNQAYMLMNGLIEIDENNKATPELFSAWEAKPGATEWVFTVRDG
VTFHNGKKLDADDILYSINLHRGDKSKSAIKTQLATITGLTKQGDNQILITLESGNADLP
YLLADYHLVVVPNGFTDWSHPIGTGGFIFDQYEPGVRSLFKRNPNYWKPDRAFVDAVEVL
VINDPTARTNALISGQVHAINRVDFKTVDFLKRSPALNIVRSSGGQHFTFLMDCSVAPYN
NNDVRMAIKHGIDRQKILDTVLRGYGSLGNDHPIPKTDRFFNHSLEQRVYDPDKSKFYLK
KAGLTDLNIELSSSDAAFAGALDAAALFQGQAQKGGIQVNIKRQPADSYWDDVWMKAPFS
MGYWGGRPTADQMFSTAYQSTAKWNDTHWKDEKFDALLLQARSLLDEGKRAEIYGELQSI
VRDDGGAMIPLFGDYLDAASKKVGGIRPHPMFNFMGGRLAERVWLEA
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgaaagataataattcccctttgacgaaattaatgcaggatgcacaacttagccgtcgc
ggctttattaccagcgtttctgctgtgggtattaccagtgctatgggcttttcaccgttc
tctgcttttgctgctgagccgaaaaaaggcggcatattaaaactgggtatgtcaggggga
aataccagtgatacgctggacccgacattattcagcgactgggtgccattaaatcaggca
tatatgctgatgaacggcctgattgaaattgatgaaaataacaaagccacacctgaattg
ttctccgcctgggaagccaaacccggtgccaccgagtgggtgtttaccgttcgtgatggc
gtcaccttccataatggtaaaaaactggatgcagatgacattctttattccatcaacctg
catcgcggcgacaaatccaaaagcgccatcaaaactcaactggccacgattaccggtctg
accaaacagggcgacaaccagatcctgatcacgcttgaaagtggcaacgccgacctgccg
tatctgctggcggattaccatctggtggtggtacccaacggctttaccgactggtcgcat
ccgatcggtaccggcggttttatctttgatcagtacgaaccgggcgtacgatcgctgttc
aagcgcaacccgaactactggaagccggatcgcgcctttgttgatgccgtggaagtgctg
gtcatcaacgacccgaccgcccgcaccaatgccctgatttccggccaggttcacgcgatt
aaccgtgtcgatttcaaaaccgtcgatttccttaaacgcagcccggcactgaacattgtg
cgttcatccggcggtcagcatttcaccttcctgatggattgcagcgtcgcgccgtacaat
aacaacgacgtgcgcatggcaattaaacacggcatagatcgccagaaaatcctcgatacc
gtgctgcgtggctacggttcgctgggcaacgaccatccgatcccgaagacagaccgcttc
ttcaatcacagcctggaacagcgcgtttacgatccggacaaatcgaagttctacctgaaa
aaagccggtctgacggatctcaacatcgaactgtcctcctctgacgccgcttttgccggt
gcgctcgacgccgccgccctgttccaggggcaagcacaaaaaggcggtattcaggtcaac
atcaaacgccagcccgccgacagctactgggacgatgtatggatgaaagccccgttcagc
atgggttactggggcggacgtccgacggctgaccagatgttctccaccgcgtatcagtcg
actgccaaatggaacgacacccactggaaagatgagaagtttgatgccctgctgttgcag
gcccgctcactgctcgatgaaggcaaacgcgctgaaatctatggtgaactgcaaagtatc
gtgcgcgacgacggcggtgcaatgatcccgctgtttggcgattatcttgatgcagccagc
aaaaaagtcggcggtatcaggccacatccgatgttcaacttcatgggtggtcgtctggcc
gagcgcgtctggctggaggcatga
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