Rahnella aceris ZF458: JHW33_04255
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Entry
JHW33_04255 CDS
T07163
Symbol
lsrA
Name
(GenBank) autoinducer 2 ABC transporter ATP-binding protein LsrA
KO
K10558
AI-2 transport system ATP-binding protein
Organism
race
Rahnella aceris ZF458
Pathway
race02010
ABC transporters
race02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
race00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JHW33_04255 (lsrA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JHW33_04255 (lsrA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
race02000
]
JHW33_04255 (lsrA)
Transporters [BR:
race02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
JHW33_04255 (lsrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
KdpD
RsgA_GTPase
AAA_29
MukB
AAA_23
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QQN35860
LinkDB
All DBs
Position
937543..939105
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AA seq
520 aa
AA seq
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MQSSKQLSADLQTTNLLLQVSGVSKSFSGVAVLKDIDFSLQCGEVHALLGGNGAGKSTLM
KIIAGVEIADSGTLLLGGEPLLALSPAKAHQAGIYLVPQEPMLFPSLTVRENILFRLPAH
QTGEKKLQQTLADLGCNLPLGALAGTLEVADQQLVEILRGLMRDARLLILDEPTASLTPA
ESTRLFTQVRHLTGQGVGVVFISHKLPEIRAIADRVSVMRDGKIALSGRLAELDNDALIR
AITPHSQDTALPAEQKLWLDLPGTRRNPAGGEPVLQVQNLTGEGFINISFSARAGEIVGL
AGVVGAGRTELAETLYGLRDARRGQVLLQQQDISGLTTLQRLKKGLVYLPEDRQASGLYL
DAPLSWNTTSLTFNRQGWWLNIKREAAVLERYHRALGIQYRDGSQTARTLSGGNQQKLLI
AKCLEAQPAVLIVDEPTRGVDVSARADIYQLLREVVQQNVAVILISSDLDEIEGLADRVF
VMHQGEMSGELQGSDINVSNIMHIAFGNHAKTRATGGTSC
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcagcaaacagttatcagcagacctgcaaaccacgaatctgctgttgcaggtc
agcggtgtcagtaaaagcttttccggcgtggcggtgctgaaagacatcgatttcagcctg
caatgcggagaagtccacgcgctgcttggcggcaatggagcgggtaaatcgacactgatg
aaaatcattgccggtgtcgaaatagccgacagcggcacgttactgctcggcggcgagcct
ttactggcgctgtcaccagcaaaagcgcatcaggcggggatttatctggtaccgcaggag
ccgatgctgtttcccagcctgaccgtgcgcgaaaacatcctgttccgcctgcctgcacat
cagaccggcgaaaaaaaattgcagcaaacgctggctgatctggggtgcaatttaccgctg
ggtgccctggccggaaccttggaagtggccgatcagcaactggtggaaatcctgcgcggg
ctgatgcgcgatgcgcggctgttgatccttgacgaaccaactgcctcgctgacaccggcg
gaatccacccgcctgtttacacaagtccgtcatctcaccgggcagggcgtcggggtggta
ttcatctcgcacaaactgccggaaatacgtgcgattgccgaccgggtcagtgtgatgcgt
gatggcaaaattgcgctcagcggcaggctcgccgaactggataacgatgcgctgatccgc
gccatcaccccgcattcccaggacaccgcgctgcccgcagaacaaaagttgtggctggat
ttacccggcacacggcgtaacccggcaggcggcgaaccggtcttgcaggtgcaaaacctg
accggtgagggttttattaatatttcattcagcgcccgcgccggggaaatcgtcgggctg
gcaggcgtggtgggggcagggcgcaccgaactggcagaaaccctgtatggcctgcgtgac
gcccgacgtggtcaggtgcttttgcagcaacaagacatcagcggcctgacgaccttacag
cggctgaaaaaagggctggtgtatttgccggaagaccggcaggcatccggcctgtatctc
gacgcgccgctgagctggaacaccacctcactcaccttcaaccgtcagggctggtggctg
aacatcaaacgcgaagcggcggtgctcgaacgctatcaccgtgcgctcggcattcaatac
cgcgacgggtcacaaactgcccgtacgctttccggcggtaatcagcaaaaactgttgatc
gccaaatgtcttgaggcacagcccgcggtgctgattgtcgatgaacctacgcgcggcgtg
gatgtgtccgcgcgcgctgacatttaccagttgctgcgcgaagtggtgcaacagaacgtg
gcggtgatcctgatttcatctgatctggatgaaattgaaggactggcggatcgggtattc
gttatgcatcagggggaaatgagcggcgaattgcagggcagcgacatcaacgtcagcaac
attatgcatatcgcgtttggtaatcatgccaaaacccgcgccaccggaggaacctcatgc
taa
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