Rahnella aceris ZF458: JHW33_04265
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Entry
JHW33_04265 CDS
T07163
Symbol
lsrD
Name
(GenBank) autoinducer 2 ABC transporter permease LsrD
KO
K10557
AI-2 transport system permease protein
Organism
race
Rahnella aceris ZF458
Pathway
race02010
ABC transporters
race02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
race00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JHW33_04265 (lsrD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JHW33_04265 (lsrD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
race02000
]
JHW33_04265 (lsrD)
Transporters [BR:
race02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
JHW33_04265 (lsrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
QQN35862
LinkDB
All DBs
Position
940175..941200
Genome browser
AA seq
341 aa
AA seq
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MNKLQQYGWEIALLALLVIEILLFGFANPRMLDASTLLFSTSDFITIGIVALPLTLVIVS
GGIDISFGSTIGLCAIALGVLCQAGVPLALAIMLTLALGATCGLLNAALILYTGVNPLVI
TLGTLYLFGGSALLLSGLAGATGFEGIGNFPDAFTNFANQIVLGLPMPLVIFLLATLFFW
LLMHRSRTGRNVFLIGQNARVARYGALPVSRTVFALYGMTGLASAVAAILMTSYFGSARS
DLGNALLMPAITAVVLGGANIYGGSGSILGTALATLLIGYLQQGLQMVGVSSQVSSALSG
ALLILVVIGRSASLNRGLIRSVFQRYRRRGSAPSPSLTSSQ
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaactccaacaatatggctgggaaatcgcgctgctggcgttgctggtcatcgaa
atcttactgttcggtttcgccaatccgcgcatgctggacgccagtacgctgctgttcagc
accagtgatttcatcaccatcgggattgtggcgttgccactgacactggtgattgtcagc
ggcggtatcgacatttcctttggttccaccatcggactgtgcgccatcgcgctcggtgta
ctgtgtcaggccggtgtgccgctggcactggccattatgcttacgctggcactgggcgcg
acctgtggtttgctcaatgcggcgctgattctttataccggcgtgaatccgctggtcatc
acgctggggacgctctacctgttcggcggcagcgccttactgctttccgggctggcgggc
gcgacgggttttgagggtatcggtaatttccccgatgcgttcaccaactttgccaatcag
attgtgctgggcctgcccatgccgctggtgatcttcctgctggcgacactgtttttctgg
ctgctgatgcaccgcagtcgcactggtcgcaacgtcttcctcatcggtcagaatgcccgt
gtggcgcgttatggcgcattgccggtcagccgcacggtgtttgcgctctacggcatgacc
gggctggcgtcggccgtggccgccattctgatgacttcgtatttcggctcggcgcgttct
gatctcggtaatgcgctgctgatgcccgctatcaccgcggtcgtgctgggcggtgccaat
atctacggcggttcaggttccattctcggcacagcgctggcgacactgctgatcgggtat
ctccagcagggtttgcagatggttggcgtctccagtcaggtttccagtgcgctgtccggc
gcgctgctgatcctggtggtgattggccgctctgccagcctcaaccgtggtcttatccgc
agtgttttccagcgctatcgccggcgcgggtctgcgccttctccttccttgacgtcttct
caataa
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