Rahnella aceris ZF458: JHW33_04270
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Entry
JHW33_04270 CDS
T07163
Symbol
lsrB
Name
(GenBank) autoinducer 2 ABC transporter substrate-binding protein LsrB
KO
K10555
AI-2 transport system substrate-binding protein
Organism
race
Rahnella aceris ZF458
Pathway
race02010
ABC transporters
race02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
race00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JHW33_04270 (lsrB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JHW33_04270 (lsrB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
race02000
]
JHW33_04270 (lsrB)
Transporters [BR:
race02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
JHW33_04270 (lsrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Glyco_tran_WecG
Gp80
DUF6848
Motif
Other DBs
NCBI-ProteinID:
QQN37158
LinkDB
All DBs
Position
941214..942230
Genome browser
AA seq
338 aa
AA seq
DB search
MKANTMKILLIASAVSLACLSAQAAERIAFIPKLVGVGYFTSGGNGAMAAGKALGADVTY
DGPTEPSVSGQVQMINNFVNQGYNAIVVAAVSPDGLCPALKRAMQRGVKVLTWDSDTKPE
CRSIYINQGTPQQLGSMLVEMTSSQVKKEKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEH
PGWEIVTTQYGYNDATKSLQTAEGILKSYGDLDAIIAPDANALPAAAQAAENLKRTNVTI
VGFSTPNVMRPYVERGTVKQFGLWDVVSQGKISVYVADQLLKKGALNVGDKLDVPDVGTV
EVVPNSVQGYQYEAKGNGIVLLPERVVFTKDNIGKYDF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccaacacaatgaaaatcttgttaattgccagtgccgtgagcctcgcgtgtctg
agcgcacaggcggctgaacgtatcgcctttatcccaaaactggtgggcgtcggttatttc
accagcggcggcaacggcgcaatggccgccggtaaagcgctgggcgcggacgtgacctac
gacggtccgaccgagccgagcgtttccggtcaggtgcagatgatcaacaacttcgtcaat
cagggatacaacgcgattgtggtggcggcggtatcacccgacggcctgtgtccggcgctt
aaacgcgcgatgcaacgcggcgtgaaagtgctgacctgggattccgataccaaaccggaa
tgccgctcgatttacatcaatcagggcacaccacaacaactgggttcgatgctggtggag
atgacctccagccaggtgaaaaaagagaaagcgaaagtggcgttcttctattccagcccg
acagtgaccgaccagaatcagtgggtgaaagaggcgaaagccaaaatcgccaaagagcat
ccgggctgggaaatcgtgaccacgcaatacggttataacgatgccactaaatccctgcaa
accgccgaagggatcctgaaatcttatggcgatctggatgcgattattgcgcctgatgcc
aacgcattaccggcagcggctcaggcggcggaaaacctcaagcgtaccaacgtgaccatc
gtcggtttcagtacgccaaacgtcatgcgcccgtatgtcgaacgcggcacggtgaaacag
ttcggtctgtgggacgtggtcagccagggcaaaatttcggtttatgtcgccgatcagtta
ttgaaaaaaggcgcgcttaacgtgggtgacaaactggatgtgccggacgtcggaacggtg
gaagtggtgccgaacagcgtgcagggctaccagtatgaggccaaaggtaacggcatcgtt
ttactgccggaacgcgtggtcttcaccaaagacaacatcggcaaatacgacttctga
DBGET
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