Rahnella aceris ZF458: JHW33_04905
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Entry
JHW33_04905 CDS
T07163
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
race
Rahnella aceris ZF458
Pathway
race02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
race00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JHW33_04905
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
race02000
]
JHW33_04905
Transporters [BR:
race02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
JHW33_04905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QQN35977
LinkDB
All DBs
Position
complement(1073714..1075231)
Genome browser
AA seq
505 aa
AA seq
DB search
MRFAPRLTACIPALMLLTSAGLAHAESTLRIGLGSDPDMLDPATARTYYGRFVFSAMCER
LVDVDQHLKIVPGLAKDWAYSDDGKTLTLHLREGVTFHDGEKFDAQSVKYNIERYLTLPG
SLRKSELSSIESVEVTAPYTVVFHLKTADAALLMQLTDRAGTMMAPEATAKGNVAAHPVC
SGPYEFVSRVQQDRIVLKRFENYWNKGAYHFDKVVFLPIPDASVRLANLRAGDLDITEGI
AASDTATVKADSNLQLASTTGLGYMGLTINIANGTANTNTPLAKDARVRQALSLAIDRDA
LNQVVFQGQYTPANQAFSPASPYHADIPVPKRDIEKAKALLAEAGVKTPLTIDFLVANNP
TSQQVAQVLQAMVSEAGINLNLQMTEYATLLDRQQRGEFKMSMSGWSGRPDPDGNIFSFL
NTKGGLNDGKYSNPQVDQWLQEARLTSDVEKRKALYKQIVVQENLDDPLVYLYFEPRIFG
MSKKVTGFVPYADGLIRLQGLALNK
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgagatttgcaccccgcttaactgcctgcattcccgccttaatgttgttgacgtctgcg
ggcctcgcccatgcggaaagcaccctgcgcatcggccttggcagcgatcctgacatgctg
gatccggccacggcgcgcacctattacgggcgtttcgtgttcagcgccatgtgtgagcgt
ctggtggatgtcgatcagcatcttaaaatcgtgccgggtctggcgaaggactgggcgtac
agcgacgacggcaaaacgctgaccctgcatctgcgcgaaggcgtgaccttccatgatggc
gagaaatttgatgcgcaatcggtgaaatacaatatcgaacgttacctgacgctgccgggt
tctttgcgcaaaagtgagctttcttccattgaatccgtggaagtcaccgcgccgtacacc
gtggttttccatctgaaaaccgcagacgccgcgttgctgatgcaactgactgaccgcgcg
ggcaccatgatggcgccggaagcgacggccaaaggcaatgtggcggcgcatccggtctgt
tccggcccgtacgagtttgtcagccgcgtgcagcaggatcgcatcgtgctgaaacggttt
gagaattactggaacaaaggcgcgtatcacttcgataaagtggtgttcctgcctattccg
gacgcctcggttcgccttgccaacctgcgtgcgggcgatttagacatcaccgaaggcatt
gccgccagcgacaccgccacggtgaaagccgacagtaatctgcaactggccagtaccacc
ggcctcggttacatggggctgacgatcaatatcgccaatggcaccgccaataccaatacg
ccgctggcgaaagatgcccgcgtgcgtcaggcgctgtcgctggcgattgaccgtgacgcc
ctgaatcaggtggtattccaggggcaatatactccggcgaatcaggccttctcgcctgcc
agcccgtatcacgccgacattccggtgccaaaacgcgatatcgaaaaagccaaagcgctg
ctggcggaagccggggtgaaaacaccgctgaccattgatttcctggtcgccaacaacccg
acttctcagcaggttgcgcaggtattgcaggcgatggtcagcgaagcgggcatcaacctg
aatctgcaaatgaccgaatacgccacgctgcttgatcgccagcaacgcggcgaattcaaa
atgagcatgtccggctggtcagggcgcccggatccggacggcaatatcttctcgttcctc
aataccaaaggcggcctgaacgacggcaaatacagcaatccgcaggtcgatcagtggttg
caggaagcgcgtctgaccagcgatgtggagaagcgtaaagccctctacaagcagattgtg
gtgcaggaaaacctcgacgatccgctggtgtatctgtacttcgaaccgcgcattttcggc
atgagtaaaaaagtgaccggtttcgtaccttacgccgacgggctgatccgactacagggt
ctggcgctgaacaagtaa
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