Rahnella aceris ZF458: JHW33_04930
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Entry
JHW33_04930 CDS
T07163
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K03487
LacI family transcriptional regulator, asc operon repressor
Organism
race
Rahnella aceris ZF458
Brite
KEGG Orthology (KO) [BR:
race00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
race03000
]
JHW33_04930
Transcription factors [BR:
race03000
]
Prokaryotic type
Helix-turn-helix
LacI family
JHW33_04930
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_3
HTH_IclR
HTH_31
Rhodanese
TetR_N
HTH_Crp_2
TrmB
Sigma54_DBD
DUF7343
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
QQN35982
LinkDB
All DBs
Position
complement(1081251..1082279)
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AA seq
342 aa
AA seq
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MSTMQEVANKAGVSKATVSRVLSGKGYVSQETKDQVFKAIEEAGYRPNLLARNLATSKSM
CIGLVVTNTLYNGNYFSELISQAAKKLDANGRQLILVDGKHSAEEEREAIQFLHDLRCDG
IIIYPRFLSVDEMDEIIDKYKKPVMVVNRKLRKHQSHCIYCDHKGSGFNATQTLIEHGHH
NIAFITGSLDSPTAIERLSGYKEALAAAGLPVRESLIAQGKWSPASGAAAVETLLMAGQT
FSAILASNDEMAIGAMKKLNEAGIAVPAQVSVIGFDNIPTAPFLIPALSSVKDPVSDMVS
EVISQIISMLDGGYLSQQNKFVSELILRDSVINGPCASISFP
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaatgcaggaagtggctaataaagcgggcgtctccaaagccaccgtttcccgt
gtactttccggtaaaggttatgtgagccaggaaacgaaagatcaggtatttaaagccatt
gaggaagcgggataccggccaaatttactggcgcgcaatctggcgaccagcaagtcgatg
tgcattggcctggtggtgaccaacacgctgtacaacggcaattatttcagtgagttaatt
tctcaggcggcaaaaaaactcgacgccaatggccgtcagttgatcctggtcgatggcaaa
cacagcgccgaagaagaacgggaagccattcagtttctgcatgatttacgctgcgacggc
attattatttatccgcgctttttatccgttgatgaaatggatgagatcatcgataaatat
aaaaaaccggtgatggtggttaaccgtaaattgcgcaaacatcagagccattgtatttac
tgcgaccacaaaggttccggttttaatgccacgcagaccctgattgaacacggtcaccat
aatattgcgtttatcaccggttccctggattccccgacggcgatagaacgtctttcgggt
tataaagaggcgctcgccgcagccggattgccggtcagggaatcgctgattgcgcaggga
aaatggtcgccagccagcggtgctgccgccgtggaaaccctgctgatggccggtcagact
ttcagcgcaattctcgccagtaacgatgaaatggcgatcggcgcgatgaaaaaactgaac
gaagccggtattgccgtacccgcacaggtttcggtgatcgggtttgataatatcccgacc
gcgccgtttcttattccggcattatcaagcgtgaaagatccggtcagcgatatggtcagt
gaagtcatcagtcagattatttccatgctcgatggcggttatttatcccaacagaataag
tttgtgtctgaacttattttgcgggattcggtgattaacggcccctgcgcctccatcagc
tttccctaa
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