Rahnella aceris ZF458: JHW33_05280
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Entry
JHW33_05280 CDS
T07163
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
race
Rahnella aceris ZF458
Pathway
race02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
race00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JHW33_05280
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
race02000
]
JHW33_05280
Transporters [BR:
race02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
JHW33_05280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QQN36045
LinkDB
All DBs
Position
complement(1157346..1158839)
Genome browser
AA seq
497 aa
AA seq
DB search
MRIPAFKPASLALLISLTTPAAFASELVIAQPASATAMDPGFLKESATLVDNLFDTLVLR
DANMQLQPGLATSWKSPDDTTWEFTLRQGVKFSDGEPVNAQAVKFSIDRILDPANHAPTI
SYIRTIKSVEVTGDYQVKIHTTGPDPLLPTRMSRYPTYIVPPAYVTKVGAAEFARKPVGS
GAYTLTAFIPDEKVVMQANPGYWRGKPAIDTVTWRPIPEATGRITALLTGEVQLVDGVPA
DLVPALKNKPGVHLEQVKNGGLTIYLGLKNDQKPLNDVRVRQALSLALNRTAYTRDLLHG
FGTPTGTMAGPKDFGYEAIPAPAQDIAKAKALLAEAGYPQGFTLRFQAPRRYIASADVAQ
AIVQDLAAIGVKAQLEVPEWSVYTQQVAAQKQAPMYMLAWGSTQTLDADAALYPILHSGE
PYSTVNSPELDALLNSSRITVDPAKREKILQEIQQVVASQQPLIPLYKEDSLYASADNVT
FTGRADSRIPLFDLRMK
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgagaatacctgcctttaaaccggcttcactggccctgcttatcagcctgacaacaccg
gctgctttcgcctctgaactggtgatcgcccagccagcttccgccacggcgatggacccg
ggtttcctgaaagagtctgccacactggtggataacctctttgatacgctggtgctgcgc
gacgccaatatgcagttgcagccggggctggcgacaagctggaaatcacccgatgatacc
acctgggagttcaccctgcgtcagggtgtgaagttcagcgacggcgagccggtcaatgcg
caggcggtgaaattctctatcgatcgtattctggatcctgcgaatcacgcgccgaccatt
tcgtatatccgcaccatcaaatccgtggaagttaccggcgattatcaggtgaaaatccac
accaccggccccgacccgctgctgccaacccgcatgagtcgctacccgacctatattgtg
ccaccggcgtatgtcaccaaggtcggtgctgcggaatttgcccgcaaaccggtgggttcc
ggcgcgtataccctcaccgcatttattcccgatgaaaaagtggtgatgcaggccaatccg
ggttactggcgcggcaagcccgccatcgataccgtcacctggcgtccgatcccggaagcc
accgggcgcatcaccgccctgctgaccggcgaagtacaactggtcgatggcgtaccggcc
gatctggtgccggcgctgaaaaacaaaccgggcgtgcatctcgaacaggtaaaaaatggc
ggactgaccatttacctcggactgaagaacgaccagaaaccgctgaatgatgtgcgcgtc
cgtcaggcgttatcactggcgctgaaccgcacggcctatacccgcgatttactgcacggt
ttcggcacgccgaccggcaccatggccggaccgaaagattttggctatgaggcgatccct
gcaccggcgcaggacatcgccaaagccaaagcgttactggcagaagcgggctatccgcaa
ggcttcaccctgcgcttccaggcaccccgccgttatattgccagtgcagacgtcgcccag
gcgattgtgcaggatctggcagccatcggcgtgaaagctcaactcgaagtgccggaatgg
tcggtctatacccagcaggtcgcggcgcagaaacaggcaccgatgtacatgctggcgtgg
ggatcaacacagacgctggacgccgatgccgcactttatccgatcctgcactccggcgag
ccgtattctacggtgaactcgcctgaactggatgccctgctgaacagcagtcgtatcacg
gtcgacccggccaaacgtgagaagattttgcaggagatacagcaggttgttgccagtcag
caaccgcttattccgctgtacaaagaagattccctgtatgccagtgccgacaacgtgacc
ttcaccggccgcgccgattcgcggatcccgctgtttgacctgaggatgaaatga
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