Rahnella aceris ZF458: JHW33_06735
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Entry
JHW33_06735 CDS
T07163
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
race
Rahnella aceris ZF458
Brite
KEGG Orthology (KO) [BR:
race00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
race03016
]
JHW33_06735 (rnd)
Enzymes [BR:
race01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
JHW33_06735 (rnd)
Transfer RNA biogenesis [BR:
race03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
JHW33_06735 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
FPL
Motif
Other DBs
NCBI-ProteinID:
QQN36322
LinkDB
All DBs
Position
complement(1510914..1512035)
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AA seq
373 aa
AA seq
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MNYELITTNDALEQVCLQAKAHSKIALDTEFVRTRTYYPQLGLIQLFDGERLTLIDPLPI
TAWQPFIDLLVDPDVIKFLHAGSEDLEVFLNAFGVMPSPLIDTQILAAFSGRPLSCGFAR
LVAETTGVELDKSESRTDWIARPLSEKQCVYAAADVWYLLPLADQLMRETQEAGWMDAAL
DECLALCRRRKEVLQPELAYLEISNAFQLRPRQLGCLKLLAAWRLNQARQRDLAVNFVVR
EENLWQVARYQPTSLGELEALGLSGPEIRYHGRTLLALVEESNALDEAELPAPILNLIDQ
PGYRKVFKDIKALIQTVSEESKLSVEMLASRRQINQLLTHHWKLKDKESQPELISGWRGK
LLAERLNEILSNY
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
ttgaattatgagttgatcaccaccaatgacgcgctggagcaagtttgtcttcaggccaaa
gcgcacagtaaaattgcgctggataccgaatttgtccgtacccgcacgtattatccgcaa
ctggggctcatacagttattcgatggcgaacggctgacgctgatcgacccattgccaatc
accgcctggcaacctttcattgatttgctggttgatcctgatgtcatcaaattcctgcat
gccggcagcgaagatctggaagttttcctgaatgcctttggggtgatgccttcgccgctg
attgatacgcagatcctcgctgctttcagcggacgcccgttgtcctgtggttttgcacgt
ctggtggctgaaaccaccggcgttgagctggataaaagcgaatcgcgcactgactggata
gcccgtccgctgagcgaaaagcaatgcgtctatgctgcggctgacgtgtggtatctgctg
ccgctggccgatcaactgatgcgtgaaacacaagaagctgggtggatggatgccgcgctg
gatgaatgccttgctctgtgccgccgccgtaaggaagtgctgcaaccggaactggcttat
ctggaaatcagtaacgcttttcagttgcgtccacgccagttgggatgcctgaagttgtta
gccgcgtggcgcctgaaccaggcccgtcagcgtgatctggccgttaattttgtagtccgt
gaggagaacctctggcaggtggcgcgctatcagccaacgtcgctgggcgagctggaagcg
cttggtctgagtggcccggagattcgctatcacgggcgtacgttgctggcgctggtggag
gaatcgaatgcactggatgaagctgaactgcccgcaccgattttgaacctgattgatcag
ccgggttaccgcaaagtctttaaggatattaaggcacttattcagactgtcagtgaagag
agtaaactgagcgttgaaatgctggcatcacgtcgccagattaatcagttactgacgcat
cactggaagttaaaagataaagaatcacaacctgaattaatcagtggctggcgcgggaag
ttgttagctgaaagactgaatgaaattttgagcaattattga
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