Rahnella aceris ZF458: JHW33_09920
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Entry
JHW33_09920 CDS
T07163
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
race
Rahnella aceris ZF458
Pathway
race00020
Citrate cycle (TCA cycle)
race00640
Propanoate metabolism
race00660
C5-Branched dibasic acid metabolism
race00720
Other carbon fixation pathways
race01100
Metabolic pathways
race01110
Biosynthesis of secondary metabolites
race01120
Microbial metabolism in diverse environments
race01200
Carbon metabolism
Module
race_M00009
Citrate cycle (TCA cycle, Krebs cycle)
race_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
race00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
JHW33_09920 (sucD)
00640 Propanoate metabolism
JHW33_09920 (sucD)
00660 C5-Branched dibasic acid metabolism
JHW33_09920 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
JHW33_09920 (sucD)
Enzymes [BR:
race01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
JHW33_09920 (sucD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
Motif
Other DBs
NCBI-ProteinID:
QQN36893
LinkDB
All DBs
Position
complement(2162294..2163166)
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AA seq
290 aa
AA seq
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MSILINKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTEHLGLPVFNTVREA
VETTGATASVIYVPAPFCKDSILEALDAGIKLIICITEGIPTLDMLVVKVKLDQSDAVMI
GPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDYGYGQSTCVGIGG
DPIPGSNFIDILKLFQEDPQTEVIVMIGEIGGNAEEEAAAYIKAHVTKPVVGYIAGVTAP
KGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEAVKSLLPQ
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattttaatcaacaagaacaccaaagttatctgccagggtttcaccggtagccag
gggactttccactccgaacaagccatcgcttacggcaccaaaatggttggcggcgttacg
ccaggcaaaggcggcaccgagcatctgggcttgccagtattcaataccgtgcgtgaagcg
gtagaaactaccggcgcaacggcgtctgtgatttatgttccggcaccgttctgtaaagac
tctattctggaagcgctggatgcaggcattaaactgatcatctgtatcactgaaggcatc
ccgacgctggatatgctggtggttaaagtgaaactggatcagagcgatgcagtgatgatc
gggccaaactgtccgggtgttatcacgccgggcgaatgcaaaatcggcatcatgccgggc
cacattcatctgccaggcaaagtgggcatcgtttcccgttccggtacgctgacgtatgaa
gccgttaaacagacaactgattacggttacggccagtctacctgcgtcggtatcggcggt
gacccgatcccgggctctaacttcatcgatatcctgaagctgttccaggaagatccacag
actgaagtgatcgtgatgatcggtgaaatcggtggtaacgcggaagaagaagctgccgcg
tacatcaaagcacacgtgactaaaccggttgtgggctatatcgcgggtgtgactgcgcct
aaaggcaaacgtatgggccatgcaggcgccatcattgccggtggtaaaggcactgctgat
gagaaatttgcagcgctggaagcggcaggcgtgaaaaccgttcgcagcctggccgatatc
ggcgaagccgtgaaatcattgcttccgcaataa
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