Rahnella aceris ZF458: JHW33_10010
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Entry
JHW33_10010 CDS
T07163
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
race
Rahnella aceris ZF458
Brite
KEGG Orthology (KO) [BR:
race00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
race03400
]
JHW33_10010 (phrB)
Enzymes [BR:
race01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
JHW33_10010 (phrB)
DNA repair and recombination proteins [BR:
race03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
JHW33_10010 (phrB)
Prokaryotic type
JHW33_10010 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QQN36910
LinkDB
All DBs
Position
complement(2184973..2186403)
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AA seq
476 aa
AA seq
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MTTHLVWFRNDLRITDNRALHAACEDPQARVIAVFVATPEQWKQHEMAPRQAMFIYQHLQ
ALQHALAERGIGLHYHQCDDFADSVTWLKDFCKTEKVDALFYNKQYEINERQRDAALENA
VSESVICHAFDDSLLLPPGSVMTGNNEMYKVYTPFRRAFLSRLTESDSRSLPAPQARGNA
EKAVTHRLMPFDYPLADIGDHFAIGEEAARNRLRSFCREQVQDYLEQRDLPAVDGTSSLS
PYLAIGVLSPRQCLNRLRAECPDVLEKTDGGAFGWLNELVWREFYRHLIVAWPKLCKHQP
FVAWTDNVRWRHAPDDLQAWKDGKTGYPIVDAAMRQLNATGWMHNRLRMIVASFLVKDLL
INWREGERYFMSQLLDGDLAANNGGWQWGASTGTDAAPYFRIFNPTTQGERFDKTGRFIK
AWVPELADVPERDIHQPHRWAEKHHRVLDYPLPVIDHAQARKDTLAAFEAAKNRSD
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgcatttagtctggttccgtaatgacctgcggataaccgacaatcgcgcgttg
catgcggcctgtgaagacccacaggcgcgtgttattgccgtatttgttgccacgcccgaa
cagtggaaacaacatgaaatggcaccgcggcaggcgatgtttatttatcaacatcttcag
gcgttacagcatgcgctggctgagcgtggcatcggtctgcattaccaccagtgtgatgat
tttgccgacagcgtgacgtggctgaaagatttctgcaaaaccgaaaaagtggatgcgctg
ttttacaataaacagtatgaaatcaacgagcgtcagcgtgatgcggcgctggagaacgcg
gtcagtgaatcggtcatctgccacgcttttgacgacagtctgctgctgccgccgggttcg
gtaatgaccggcaataatgaaatgtacaaggtttatacgccttttcgccgcgcgttttta
tcccgcctgaccgaatctgacagccgttcgctgcctgcgccacaggcgcgaggaaatgct
gaaaaagcggtgacacaccggctgatgccgttcgattatccgctggcggatatcggcgat
cattttgcgattggcgaggaagccgcgcgtaaccggctgcgcagtttttgtcgtgaacag
gtgcaggattacctcgaacaacgtgatttaccggcggtcgacggcaccagttcgctttcg
ccgtatctggccattggcgtgctttcgccgcgccagtgtctgaaccgtctgcgcgccgaa
tgcccggacgtgctggagaaaaccgacggcggcgcgttcggctggctgaatgagctggtg
tggcgcgagttttaccgccatctgatcgtcgcctggccgaaactttgcaaacatcagccg
ttcgttgcatggactgacaacgtgcgctggcgtcatgcgcccgatgatttgcaggcgtgg
aaagacgggaaaaccggttatccgattgtagatgcggctatgcgtcagctgaatgcgacg
ggctggatgcataaccgtctgcgtatgattgtcgccagttttctggtgaaggatttactg
atcaactggcgtgaaggcgaacgctatttcatgtcgcagcttctggatggtgatctggcg
gccaacaacggcggctggcagtggggtgcctcgacgggtactgacgccgcgccgtatttt
cgtattttcaatccgacgacacagggcgaacgttttgataaaaccggacgctttatcaaa
gcctgggtgcctgaactcgcggatgtgccggaaagagacattcatcaaccgcatcgctgg
gcggaaaaacatcatcgcgtgctagactacccgctgccggttattgatcacgcgcaggcg
agaaaagacacgctcgcggcgtttgaggcggcaaaaaaccggtcagactga
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