Rahnella aceris ZF458: JHW33_10265
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Entry
JHW33_10265 CDS
T07163
Symbol
rlpA
Name
(GenBank) endolytic peptidoglycan transglycosylase RlpA
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
race
Rahnella aceris ZF458
Brite
KEGG Orthology (KO) [BR:
race00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
race01011
]
JHW33_10265 (rlpA)
Enzymes [BR:
race01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
JHW33_10265 (rlpA)
Peptidoglycan biosynthesis and degradation proteins [BR:
race01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
JHW33_10265 (rlpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
DUF6491
Adeno_PV
Motif
Other DBs
NCBI-ProteinID:
QQN36949
LinkDB
All DBs
Position
2238656..2239807
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AA seq
383 aa
AA seq
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MRKEWLGAVIIGLLLSGCATEDTQQQQPAPQQAYNGPVVEIGGADPRYEPYNQGTMQDYT
VNGKTYKIIKDPSNFSQVGQAAWYSQENGGNTTALGEEFDPTAMTAAHPTLPIPSYVRVT
NMATGRMLVVRVNDRGPYVPGKIIDLSQAAADRLNLTNSTKVRIDFINVAPDGTLSGPGT
IGTTVAKQSYALPSRPSLGASNMGTPTLTAEPTNTSDVRPISNSTLSNPNAAPLTNDEDN
NGTVASAPAATTMSGNSGGGGFLSAPTPLRQGVLEGSEPVTAPVAVASAAPVAAAAASAA
PAHTTAIPSSGFMVQVGALSNPQNAQLWQKSLSQRFSVPGKVQANGSTYRVQLGPFSTRQ
QAEQLKQRLASEAQQQSFVTAGM
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaaggagtggcttggagctgtcattatcggtttgctgttaagtggttgtgccact
gaagatacacagcaacaacaaccggcaccgcagcaagcctacaatggccctgtggtagaa
atcggcggggctgatccgcgttacgaaccttataatcagggcacgatgcaggattatacc
gttaacggtaaaacctataagatcatcaaagacccgtccaacttttcgcaggtggggcaa
gcggcctggtacagtcaggagaatggaggcaacactaccgcgctcggtgaagaattcgac
ccgacagccatgaccgctgcgcatccgacattgccgatcccaagctatgtccgcgtcacc
aacatggcgacaggacgcatgctggtcgtgcgtgttaacgatcgtggcccttatgtgccg
ggcaaaattatcgatttgtctcaggctgcggcagaccgtctgaacctgaccaacagcacc
aaagtacgcattgattttatcaacgttgcgcctgacggcacgctctccggcccggggact
attggtacgaccgtcgccaaacaatcttatgcattaccgtctcgtccaagtttaggcgcc
agcaacatgggtacgccgacgctgacagcagagccgacgaatacgtcagatgtacgcccg
atcagtaacagcaccctgagtaatcctaatgctgcgccattaacgaatgacgaagataac
aacggcaccgtagcctctgcgccagcagcaaccacgatgtccggtaacagcggcggcggc
gggtttctgagcgcgccaacacctctgcgtcagggtgtgttagaaggcagcgaaccggta
acagcaccggttgctgtcgccagtgccgcgccggtagcagctgctgcggcctccgcagcg
cctgcgcataccactgccattccttcctcgggatttatggtacaggttggcgcactgagt
aatcctcagaacgcgcaactgtggcaaaaaagcctcagccagcgcttctctgtacccggt
aaagtacaggcgaatggcagcacctatcgcgtgcagcttggtccgttcagcacccgccag
caggccgaacagctgaaacagcgactggccagcgaagctcagcagcagtctttcgtcact
gctggcatgtaa
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