Rahnella aceris ZF458: JHW33_11185
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Entry
JHW33_11185 CDS
T07163
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
race
Rahnella aceris ZF458
Brite
KEGG Orthology (KO) [BR:
race00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
race03400
]
JHW33_11185 (sbcD)
DNA repair and recombination proteins [BR:
race03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JHW33_11185 (sbcD)
Archaeal homologous recombinant proteins
JHW33_11185 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
QQN33058
LinkDB
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Position
2440805..2442043
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AA seq
412 aa
AA seq
DB search
MRLIHTSDWHLGQYFFTKSRAAEHQAFLRWLTGQVQQHQVDAVIVAGDIFDTGSPPSYAR
ELYNRFVVELQQTGCQLVVLAGNHDSVATLNESRELLSCLNTRVIATVGENLSEQILVLS
QRDGKPGAILCAIPFLRPRDLLASQAGQSGSDKQLALQEAIAAHYDALWQAAQARRDELG
MPLPIIATGHLTTVGVSTSDSVRDIYIGTLDAFPAQAFPPVDYVALGHIHRAQCVAKTEH
IRYSGSPIALSFDELSKAKSVYLLDFDGATLNAIDTLEIPVFQPMQIIKGSLVEIEHQLA
QFEGGDPAKPVWLDIEVSTQDYLSDIQRRIQALTEDLPVEVVLLRRSKEQRINSIEQQEK
ETLSELSVSDVFERRLALEPDPDEPRQARMRTLFAQVVEQVTNGQNAEDGAQ
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgatccacacgtcagactggcacctcggccagtactttttcactaaaagccgt
gcagccgaacatcaggcatttttgcgctggctgaccggtcaggtgcaacaacatcaggtc
gacgccgtgattgtcgcgggcgatattttcgacacgggatccccacccagttatgcccga
gaattgtataaccgcttcgtggtggaattacagcaaaccggctgccagctggtggtgctg
gctggtaaccacgactctgtcgccacgctcaatgaatcgcgcgagctcctgtcctgcctg
aatacgcgggtgattgccaccgtcggtgaaaacctttctgaacagattttagtgctcagt
cagcgtgacgggaaacccggcgcgatactgtgcgctatcccgtttttacgcccgcgtgat
ctgctcgccagccaggcgggacagtccggcagcgacaagcaactggcattgcaggaagcc
atcgccgcgcattatgacgcgctctggcaggctgcgcaggccagacgtgacgaactgggc
atgccgctgcctattattgcgaccggccatctgacgactgtcggcgtcagtacctcagat
tccgtgcgcgacatctatataggtacgctcgatgcgtttccggcgcaggcctttccgccg
gtcgattatgtggcactgggtcatattcaccgtgcacaatgcgtcgccaaaaccgaacat
atccgttacagcggctcgccgattgccctgagttttgacgaactgagcaaagctaaaagt
gtgtacttacttgattttgatggtgcgacgctcaacgccatcgacacactggaaatcccg
gttttccagccgatgcagataatcaaaggctcgctggtggagattgaacaccaactggca
cagttcgaaggcggtgatccggccaaaccggtgtggctcgatattgaagtctccacccag
gattatctcagcgacatccagcgacgcattcaggcgctgacggaagatctgccggtagaa
gtcgtgctgttacgccgcagcaaagaacagcgcatcaacagtattgagcagcaggaaaaa
gaaaccctcagcgaactgagcgtcagcgacgtgtttgaacgacgactggcgctggaaccg
gaccctgacgagccgcgtcaggctcggatgcgcacgttgtttgcgcaggtggttgaacag
gttaccaacggtcagaacgcggaggacggcgcacaatga
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