Rahnella aceris ZF458: JHW33_11190
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Entry
JHW33_11190 CDS
T07163
Symbol
sbcC
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
race
Rahnella aceris ZF458
Brite
KEGG Orthology (KO) [BR:
race00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
race03400
]
JHW33_11190 (sbcC)
DNA repair and recombination proteins [BR:
race03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JHW33_11190 (sbcC)
Archaeal homologous recombinant proteins
JHW33_11190 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
ABC_tran
AAA_21
cobW
nSTAND3
TsaE
AAA_22
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
QQN33059
LinkDB
All DBs
Position
2442040..2445288
Genome browser
AA seq
1082 aa
AA seq
DB search
MKILSLRLKNLNSLEGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR
LNITPSQNELMTRHTAESLAEVEFEVKGVGYRAFWSQRRAKNSPDGNLQAPKVELALLAD
GKILADKVRDKLDAIATLTGLDFGRFTKSMMLSQGQFAAFLNADANDRAELLEELTGTEI
YGLLSQRVFEQHKEARIALDGLHQRMAGIELLSEEQRQTLEAQRAELNAQEISLSQQAQQ
RQQDLNWLQQWQQVQQKHLQSQQQLTAAEQENLTAAPQLQQLARSEPAEKLRPLLNDRQR
CQDDAQRLQQLLIQLTQQQEQQIAQMTPLSLAVEQAHTARQKQAQEQRQMQTLIEEKILP
LDSEIAQWRKSLVETQQAVSESQKQAGEHSATLQQITAERQKLDEESRQHHTRQAALTEA
LNVAQQRQAELEKQYPQVVLQKRQTELMQLRPVRQQLFSLAQIFPQLNQRVQQQHKDFAQ
YQTLLAEEELRLGAIRLQCQKQLEHLNDVKALHKQEMLIVSLEAERANLESGKACPLCGS
TSHPAIEHYQQVKPSETAQRVEKMQLEFDAAKASGIELAAKIKGLKEQQTRLQTQLEQDQ
QQLNAHTLNWQQLSAPLNLTFTLHDTADITQWLTARDEEEQQSQARLSQHEQLARALQQA
KDALNDALNAQQKVQQQSALLTERVTRLEEMQAKSQQDLVRLQKQLAEGEKSLSELNARR
LELFGERQVTQVREHLHQQQQATEQALSDVQTALHKAQEQRDQLAGQLASTQQQQLQTAA
QLTQVEQAWQQALSASGFADEAAVKLALLDDALRQQLQQRKEHLQQQLAQAQALLADARQ
QLEKHQLARPAHLSETDSDLNALTVQQAELAQQLKVLQQRLGEVKNQLESDKQRHHGQQT
LIAQIAQAQRTCDDWGYLNQMIGSSDGAKFRKFAQGLTLDHLVYLANRQLEKLHGRYLLQ
RKTSDALELQVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSDKTRIDSLFLDEG
FGTLDADTLDTALDALDSLNASGKTIGVISHVEAMKDRIPVQIKVTKVNGLGISRLSSEF
KV
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcagcctgcgtttaaaaaacctgaactcgctggaaggcgaatggaaaatt
gatttcaccgccgagccgtttgccagcaacggattattcgccatcaccggtccgaccggt
gcggggaaaaccaccctgctcgatgccatttgtctggcgctttatcatcagacgccacgg
ctgaacattacaccaagccagaatgaactgatgacccgccacaccgcagaatcgctggcc
gaggtggagtttgaagtcaaaggcgtgggttatcgcgcgttctggagccagcgccgcgcc
aaaaattcccctgacggcaatctgcaggcaccgaaagtcgagctggcgttactggccgac
ggcaaaattctggccgataaagtgcgcgacaaactcgacgccatcgccacactgaccggg
ctggatttcggtcgtttcaccaaatccatgatgctttcacaggggcagttcgccgcgttt
ctgaatgccgatgccaacgaccgcgccgaattgctggaagaactgaccggcaccgagatt
tacggtctgctttctcaacgcgtgtttgagcaacataaagaagcgcgcattgcgctggac
ggtctgcatcagcgtatggccggaatcgaactgctcagcgaagaacagcgccagacgctc
gaagcacaacgtgctgaactgaacgcgcaggaaatcagcctcagtcagcaggcgcagcag
cgccagcaggatctgaactggctgcaacagtggcagcaggtgcagcaaaaacacctgcaa
tctcagcaacaactgaccgccgcagagcaggaaaacctgacagccgcgccgcagttacag
caactggcgcgcagcgaaccggcagaaaaactgcgtccgttactcaatgatcgccagcgc
tgtcaggatgacgcgcagcgccttcagcaattactgatacaactgacgcagcagcaggag
cagcagattgcacagatgacgccgctgagtctggcggtggaacaggcgcacactgcgcgg
cagaaacaggcgcaagaacagcgccagatgcaaacgctgatcgaagaaaaaatcctgcca
ctggatagcgaaatcgcgcaatggcgcaaatcgctggtggaaacacaacaggcggtcagc
gagtcgcagaaacaggctggtgaacatagcgcgacgctgcagcaaatcacggcggaacgc
cagaaactggatgaggaaagccgccagcatcacacccgtcaggccgcgctgactgaagcc
cttaacgttgcacaacaacgtcaggctgaactggaaaaacagtacccgcaggtagtgtta
cagaaacgtcaaaccgaactcatgcagctccggccggtgcggcagcagctgttttcactc
gcgcaaatcttcccgcaactgaaccagcgcgtgcagcaacagcataaagattttgcgcag
taccagacgctgctggccgaagaagaactgcgtctgggcgcgatccgtctgcaatgtcaa
aaacaactggaacatctgaacgacgtcaaggcgctgcataaacaggaaatgctgatcgtc
agcctcgaagccgaacgcgcgaatctggaaagcggcaaagcctgtcctctgtgcggctcg
acatcacatccggcgattgaacattatcagcaggttaaaccttctgaaaccgcgcagcgc
gtcgagaaaatgcaactggaattcgatgcagcaaaagccagcggtatcgaactggcggcg
aaaattaaaggcctgaaagagcaacaaacacggctgcaaactcagcttgagcaggatcag
caacaactgaatgcgcataccctgaactggcaacaactcagtgcgccgctgaatctgacg
tttacgctgcatgataccgccgacatcacgcaatggctgaccgcccgcgatgaggaagag
cagcagtcgcaggcgcggctgagccagcacgaacagctggcgcgggccctgcaacaggcc
aaagatgccctgaacgacgcactgaatgcacagcagaaagtgcagcagcaaagtgccttg
ctgacagagcgcgttacccggctggaagagatgcaggcaaaatctcagcaagacctcgtg
cggttgcaaaagcaactggcggaaggtgaaaaatccctttctgagctgaatgcccgacgc
ctcgaactgttcggagagcgtcaggttactcaggttcgcgagcacttacatcagcaacaa
caggcgacagaacaagcgctgagtgatgtccagaccgcgctgcataaggcgcaggaacag
cgcgaccagttggccggtcagttggccagtacgcagcagcaacagttacagaccgccgca
caactgacgcaggtggaacaggcgtggcagcaggcattgagcgccagcggatttgcggat
gaagccgctgtgaaactggcgctgctcgacgacgcgttgcgccagcagcttcagcaacgt
aaagaacatctgcaacaacaactggcacaggcgcaggcattactggcggatgcccgtcag
cagctcgaaaaacatcagcttgcccgtcctgcacatctcagtgaaaccgacagtgatctt
aacgccctgacggtgcaacaggcggagctggcacaacaactgaaagtcctgcagcaacgt
ctgggcgaagtgaaaaatcagctggaaagcgacaagcaacgccaccatggtcagcagacg
ctgattgcacagattgcgcaggcgcagcgaacctgtgatgactggggttatctcaaccag
atgattggttccagcgacggcgcgaaattccgtaaattcgcgcagggtctgacgctcgat
catctggtgtatctggccaaccgccagctggaaaaattgcacggacgctatctgttgcag
cgcaaaaccagcgatgcgctggaactgcaggtggtcgatacctggcaggccgatgccgtg
cgcgatacccgcacactatccggcggcgaaagcttcctggtcagcctggcactggccctg
gcgctgtccgatctggtcagcgataaaacccgtatcgactcgctgttcctcgacgaaggt
ttcggcacgctcgatgccgacacgctggataccgcgctggatgcgctcgacagtctgaat
gcctcgggtaaaaccatcggcgtgatcagccatgtcgaagcaatgaaagaccgcattccg
gtacaaatcaaagtcaccaaagtgaatggtctgggcatcagccgcctgagcagtgaattt
aaagtctga
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