Rahnella aceris ZF458: JHW33_12685
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Entry
JHW33_12685 CDS
T07163
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
race
Rahnella aceris ZF458
Pathway
race02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
race00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JHW33_12685
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
race02000
]
JHW33_12685
Transporters [BR:
race02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
JHW33_12685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_11
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
QQN33331
LinkDB
All DBs
Position
complement(2767884..2768972)
Genome browser
AA seq
362 aa
AA seq
DB search
MKTGTVLFLSGMLLSGAATATPLAQQDWDLVVAQAKKEGSVTFNVWYLQPQWRSFVADFE
KQYGIKVRIPEGSIDGNMNKLLAEARREKGKMDVVALSVAQLPIIRKANALAQVDWLPGY
GDAVHQLQSVNTEGYAVAFWGNQTGMAYDPQQMGNQPLPQSLDDLQHFIDANPKKFGYND
PNNGGAGEAFIQRVVTLSSGTFDADATQVDPDIIKNWKKGWEWFVGNKEKITQTASGADS
LTRLNDGELLLVPAWEDHLAGLQKSGAITGRLKFYIPAFGMPGGGNIAAIAANSTHPAAS
AVFLNWLTQAETQRALNVAFGAVPMNKQVKTDVVQPDIATQFYGKEYSMQLRKEFVRQVS
MQ
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaggcacggttttatttctcagtggcatgttattgagcggggcagcgaccgcc
acaccactggcacaacaagattgggatcttgtcgtcgcacaggccaaaaaagaaggctca
gtcaccttcaacgtctggtatttacaaccgcaatggcgcagtttcgttgctgattttgaa
aaacagtacggaattaaagtgcgtattccggaagggtcgattgatggcaacatgaataaa
ctgctggcggaagctcgccgcgagaaaggcaaaatggacgtggtggccttgtcggtggcg
cagttaccgatcatccgtaaagccaatgccctggcgcaggtagactggctgccgggttac
ggggatgcggtgcatcagttgcaaagcgtgaatactgaaggatatgcggttgccttttgg
ggcaaccaaaccggtatggcctacgatccgcaacagatgggcaatcaacctttgccgcaa
tcactcgatgatttacaacactttatcgatgcgaatccgaagaagtttggttacaacgat
ccgaataacggcggggcaggcgaagcctttattcagcgcgtggtcaccctctcctccggc
acatttgatgccgatgccacgcaagtcgatcctgacattattaaaaactggaaaaagggt
tgggaatggttcgtcggtaataaagaaaaaatcacccagaccgcatcgggtgcagatagc
ctgacccgtctgaatgatggcgaattattgctggtacccgcctgggaagatcatctggca
ggtttgcaaaaatccggggcgattaccgggcgcctgaaattttatattccggcttttggt
atgccgggagggggcaatattgcggctattgccgcaaacagcacacatccggcggcgtcg
gcggtgttcctgaactggttaacgcaagctgaaacccagcgtgcgttgaatgtcgctttc
ggcgcggtgccgatgaacaaacaagtgaaaacagacgtggtgcagccagacattgccacg
cagttttacggcaaggaatacagcatgcagctcagaaaagagtttgtacgccaggtttct
atgcaataa
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