Rahnella aceris ZF458: JHW33_12920
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Entry
JHW33_12920 CDS
T07163
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
race
Rahnella aceris ZF458
Pathway
race00061
Fatty acid biosynthesis
race00071
Fatty acid degradation
race01100
Metabolic pathways
race01212
Fatty acid metabolism
race02024
Quorum sensing
race04146
Peroxisome
Module
race_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
race00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
JHW33_12920
00071 Fatty acid degradation
JHW33_12920
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
JHW33_12920
09145 Cellular community - prokaryotes
02024 Quorum sensing
JHW33_12920
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
race01004
]
JHW33_12920
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
race04147
]
JHW33_12920
Enzymes [BR:
race01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
JHW33_12920
Lipid biosynthesis proteins [BR:
race01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
JHW33_12920
Exosome [BR:
race04147
]
Exosomal proteins
Exosomal proteins of breast milk
JHW33_12920
Exosomal proteins of breast cancer cells
JHW33_12920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QQN33374
LinkDB
All DBs
Position
complement(2823941..2825737)
Genome browser
AA seq
598 aa
AA seq
DB search
MNPTLNDYHLISRFRQQVVARAEQTAFREWSPAAESALTWRELGEKVDALSDVLLQEQVG
VQERIAICGNNSMAWATADLAILQLRAVTVPVYATNTPAQSAYVLNDADVRILFVVGQKQ
YDAAVAVCDLCPQLKHILVLDNDVDLRGVPIARHVSGVVPRDAALAAEREVRVNARDLSD
LFTLIYTSGTTGEAKGVMLDYRSMATQLMQHERRLSISEHDVSLCFLPLAHVFERAWSFF
VMHCGAQNVFLRETDLVRDALQAIKPTVMCAVPRFYEKVFSAIHDKVSRAGTLKKRLFHW
AVGQGKEKFLIERRGERYPFWLAPAHFLADKLVLKKLRDLLGGNLRFLPAAGASLDDNVI
LFFESLGLKIKYGYGLTETCATVTCWEENDFRFGSVGTALPEIEVRIGEENEIQVRGPTL
LRGYFNKPEETAASFTADGWFKTGDAGKMDAQGNVFITERLKDLMKTSGGKYIAPQRIEG
TLVQDRYIEQAAVIADERHFVSALIVPDFDVLNVYAQAHRIDYFNRAGLVKNEQILSLFA
HQLREIQHDLAGFEQVKKFVLLTKPFTMEAGELTPTLKLRRKNIFSRYQKEIDQLYQE
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgaatccaaccttaaatgattaccatctgatttcccgttttcgtcagcaagtcgttgcc
cgcgctgaacagactgcatttcgcgagtggtcgccagcggcagaatctgccctgacctgg
cgtgagctgggcgagaaagtggatgccttatccgacgtgttattgcaggagcaagtgggc
gttcaggaacggatcgccatttgcgggaataattcgatggcctgggcgacagcagatctt
gcgatcctgcaattgcgtgctgtcaccgtgccggtttatgccaccaatacacccgcgcag
tccgcatatgtactcaatgatgcggatgtccgtattttgtttgtcgtcggtcagaaacaa
tatgacgcggcggtggctgtgtgtgatctctgcccgcagctgaaacacatactggtgctg
gacaatgatgtcgatttacgtggcgtacccattgcccggcatgtttcaggcgttgttccc
cgggatgctgctttagctgctgagcgtgaagtgcgggtgaatgcccgtgacctgagtgat
ctgttcacgctcatctatacctcgggcaccaccggagaagcaaaaggcgtgatgctggat
taccgcagcatggcgacgcaactgatgcagcatgaaaggcgtctgagcatttcggagcat
gatgtttccctttgttttctgccgctggcgcacgtttttgaacgcgcatggagtttcttc
gtgatgcattgcggtgcgcaaaacgtcttcctgcgcgaaactgatctggtgcgtgatgct
ttgcaggccattaaaccgacagtaatgtgtgcggtaccgcgcttctatgaaaaagtgttc
agcgcgatccacgacaaagtctctcgcgcgggaaccctcaaaaagcggcttttccactgg
gccgtcgggcagggcaaagagaagtttttgatcgagcgccgtggcgaacgttatccgttc
tggctggcgcctgcgcattttctcgccgataaactggtgctaaaaaagctgcgtgatttg
ctgggtggcaatctgcgttttctgcctgccgccggtgcaagtctggacgacaatgtcatt
ctgtttttcgaatcactcggtctgaaaatcaaatacggctacggcctgacggaaacgtgc
gcgacggtgacctgctgggaagaaaatgatttccgctttggttctgtcggaacggcgtta
ccagagattgaagtgcggatcggcgaggagaatgagattcaggttcgcggcccaacactc
ctgcggggttacttcaataaaccggaagagacggcggccagtttcactgccgacggctgg
tttaaaaccggtgatgccgggaaaatggatgcacaagggaatgtgtttattaccgaacga
ctcaaagatctgatgaaaacgtcgggcggaaaatacattgctccgcagcgtatcgaaggc
acgctggtgcaggatcgttatatcgagcaggcggcagtcatcgccgatgaaaggcacttt
gtttctgcgctgatcgtgcctgattttgatgtgctgaacgtgtatgcccaggcgcaccgt
attgattatttcaatcgcgccggactggtgaaaaacgagcagatcctctcgctgtttgcc
caccagctacgcgagattcagcatgatcttgccggttttgagcaggtgaaaaagtttgtg
ttgctgaccaaacctttcacgatggaagcgggtgaactgaccccgacccttaaactgcgc
cgcaaaaatattttcagccgttatcagaaggaaatcgatcagctttatcaggagtaa
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