Rahnella aceris ZF458: JHW33_13000
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Entry
JHW33_13000 CDS
T07163
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
race
Rahnella aceris ZF458
Brite
KEGG Orthology (KO) [BR:
race00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
race03021
]
JHW33_13000 (rapA)
Transcription machinery [BR:
race03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
JHW33_13000 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_34
Cas3-like_C_2
Helicase_RecD
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
QQN33389
LinkDB
All DBs
Position
2843964..2846861
Genome browser
AA seq
965 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVALDVRMVTLLFPATGENRLYARNDSPITRVMFNPGDT
ISCHEGWQLQVEEVVEDKGLLTYIGTRLDTEETGVAMREVLLDSKLTFSKPQDRLFAGQI
DRMDRFALRFRARKYQREQFRLEFGGLRGMRASLIPHQLHIAYEVGQRHAPRVLLADEVG
LGKTIEAGMIIHQQLLSGRAERILIVVPETLQHQWLVEMLRRFNLRFSLFDDDRYAESIH
EATNPFETEQLVICSLDFVRRNKSRLEQLSDAAWDMLVVDEAHHLVWSEDAPSREYQVIE
QLSQQIPSVLLLTATPEQLGQESHFARLRLLDPDRFHDYEEFIEEQQQYQPVADAVTLLL
NKEPLTPEALALLGESVGNADTDALLTAANKGDEAAAKQLVSMLMDRHGTSRVLFRNTRN
GVKGFPERHLHAVKLPLPTQYQTAIKVSGIMGAKKTAEARAHDMLYPEQIYQEFEGENAT
WWNFDPRVEWLLGYLTANRDEKVLVICAKAATALQLEQVLREREAIRAAVFHEGLSIIER
DRAAAYFASQEEGAQVLLCSEIGSEGRNFQFASKMVMFDLPFNPDLLEQRIGRLDRIGQQ
NNIDIMVPYLEQTAQSVLVRWFHEGLDAFEHTCPTGRTIYDSAYEQLIAFLAAPAAQEGL
DEFILTCRAEHDALKEKLENGRDRLLEMHSNGGERAQQLAKEIGEQDNDVNLVNFALNLF
DIVGINQEDRSDNLIVLTPSDHMLVPDFPGLPEDGCTVTFDREQALSREDAQFISWEHPI
VRNGLDLILSGDTGSCAVSILKNKALPVGTLLAELVYVVECQAPKHLQLTRFLPPTPVRM
LMDRKGTNLAAQVEFESFNRQLNAINRHNSSKLVNAVQQDVHAMLQQAEAEIADQARALI
EAAKVEADEQLTKELDRLKALKEVNPNIRDDELESVDSNRKQVLANLNDASWRLDAIRLV
VVSHQ
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgccgtttacattaggtcaacgctggataagcgatacggaaagcgaattaggattagga
accgtagtcgcgctggatgtgcgcatggtcaccctgcttttccccgccaccggtgaaaac
cgtttgtatgcccgaaatgattccccgatcacccgcgtgatgttcaaccccggtgatacc
atcagctgtcacgaaggctggcagttgcaggtcgaagaagttgttgaagacaaaggtctg
ttgacctatatcggcacccgtctggacacagaagaaaccggcgttgccatgcgcgaagtg
ctgctcgacagcaaactgaccttcagcaaaccgcaggatcgtctgttcgccggtcagatt
gaccgcatggaccgttttgccctgcgtttccgcgcccgtaaatatcagcgtgaacagttc
cgtctggaattcggcggtctgcgcggtatgcgtgccagcctcatcccacatcagttgcac
atcgcttatgaagtcggtcagcgccatgcgccgcgcgttttactcgccgatgaagtgggg
ctgggcaaaaccatcgaagcgggcatgattattcatcagcaactgttgtccggccgtgcc
gaacgcatattgatcgtggtgccagaaaccctgcaacaccagtggctggtagaaatgctg
cgccgcttcaatctgcgcttctctttgtttgacgacgatcgctacgctgaatccatccac
gaagcaacgaacccgtttgaaactgaacaactggtgatctgttcccttgatttcgtgcgc
cgcaataaatcccgtctggagcagttatccgatgcggcctgggatatgctggtggtcgac
gaggcccaccatctggtgtggagcgaagacgcgccgagccgcgaatatcaggttatcgaa
cagctttcccagcaaatcccgagtgttctgctgctgaccgctacgccggaacaactggga
caggaaagccactttgcgcgcctgcgcctgctggatccggaccgtttccacgattacgaa
gaattcatcgaagaacaacagcaatatcagccggtggctgatgccgtgacgctgttactc
aacaaagaacccctgacgccggaagcgctggcgctgctcggtgaaagtgtcggcaatgcc
gataccgatgccctgctgaccgccgccaataaaggcgacgaagccgcagcgaaacagctg
gtttccatgctgatggaccgtcacggtaccagccgcgtactgttccgtaacacccgtaat
ggcgtgaaaggtttccctgagcgtcatctgcatgcggttaaactgccgctgccgacgcag
tatcagaccgcgataaaagtctcgggcattatgggcgcgaagaaaaccgccgaagcccgt
gcgcacgacatgctgtatccggaacagatttatcaggaatttgaaggcgagaacgctacc
tggtggaactttgatccgcgcgtcgaatggctgctcggttatctgaccgccaaccgcgac
gaaaaagtactggtgatctgcgctaaagccgccactgcattgcaactggaacaggttctg
cgggagcgtgaagcaatccgtgctgctgtgttccacgaaggtttgtcgatcatcgaacgt
gaccgcgccgccgcttactttgcttcccaggaagaaggcgcgcaggttctgctgtgttct
gaaatcggctccgaaggccgtaacttccagtttgccagcaagatggtgatgttcgacctg
ccgttcaacccggatctgctggaacagcgtatcgggcgtctggatcgtatcggccagcaa
aacaatatcgacatcatggtgccatacctcgagcagaccgcgcagtcggtactggttcgc
tggttccatgaaggtctggacgcattcgaacatacctgtccgaccggccgcaccatttac
gacagcgcttatgagcaactgattgcgttcctggcggcaccggccgcgcaggaaggtctg
gacgagttcattcttacatgtcgcgccgaacatgacgcgctgaaagagaagctggaaaat
ggccgtgaccgcctgctggagatgcattccaacggtggcgaacgtgctcaacaactggcg
aaggaaatcggcgagcaggataacgacgttaacctggtcaactttgcgctgaacctgttc
gatatcgtcggcatcaatcaggaagatcgcagcgataacctgatcgtcctgacgccgtct
gatcacatgctggtgccggatttcccgggtctgccggaagacggttgcaccgtgaccttc
gatcgtgaacaggcgctctcgcgtgaagatgcacagtttatcagctgggaacatccgatc
gtgcgtaacggtctggatctgatcctttccggtgataccggcagttgtgcggtatcgatc
ctgaaaaacaaagcgctgccggtcggtaccttgctggcggaactggtttacgtggtggaa
tgtcaggcgccgaagcatctgcaactgacccgtttcctgccaccaacaccggtgcgtatg
ctgatggatcgtaaaggcaccaatctggcggctcaggttgaatttgagagttttaaccgt
cagctgaatgccatcaaccgtcacaactccagtaaactggtgaatgccgtgcagcaggat
gttcacgccatgctgcaacaggcagaagcggaaattgccgatcaggcacgcgccctgatt
gaagcagcgaaagtggaagctgacgagcaactgaccaaagaactggatcgtctgaaagcg
ctgaaagaagtgaacccgaacattcgcgatgacgaactggaatcggtagactctaaccgt
aagcaggtgctggcgaatctgaacgatgccagctggcgtctggatgcgatccgcctggtg
gtggtcagccatcagtaa
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