Rahnella aceris ZF458: JHW33_15135
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Entry
JHW33_15135 CDS
T07163
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
race
Rahnella aceris ZF458
Pathway
race00071
Fatty acid degradation
race00280
Valine, leucine and isoleucine degradation
race00310
Lysine degradation
race00362
Benzoate degradation
race00380
Tryptophan metabolism
race00410
beta-Alanine metabolism
race00640
Propanoate metabolism
race00650
Butanoate metabolism
race00907
Pinene, camphor and geraniol degradation
race00930
Caprolactam degradation
race01100
Metabolic pathways
race01110
Biosynthesis of secondary metabolites
race01120
Microbial metabolism in diverse environments
race01200
Carbon metabolism
race01212
Fatty acid metabolism
Module
race_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
race00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
JHW33_15135 (fadB)
00650 Butanoate metabolism
JHW33_15135 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
JHW33_15135 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
JHW33_15135 (fadB)
00310 Lysine degradation
JHW33_15135 (fadB)
00380 Tryptophan metabolism
JHW33_15135 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
JHW33_15135 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
JHW33_15135 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
JHW33_15135 (fadB)
00930 Caprolactam degradation
JHW33_15135 (fadB)
Enzymes [BR:
race01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
JHW33_15135 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
JHW33_15135 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
JHW33_15135 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
JHW33_15135 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
B12-binding_2
Motif
Other DBs
NCBI-ProteinID:
QQN33765
LinkDB
All DBs
Position
3318324..3320516
Genome browser
AA seq
730 aa
AA seq
DB search
MLYQGETLHLHWLDGGIAELVFDAPGSVNKLDTQTVASLGEAIAVLEKQSDLKGLLLSSA
KPAFIVGADITEFLSLFNAPAEKLHEWLDFANSIFNRLEDLPVPTLSAISGYALGGGCEC
VLATDFRISTADARIGLPETSLGIMPGFGGSVRLPRLIGTDSALEIIAAGKNISGKEALK
VGLVDAVVEADKLRDAGISMLRNAVDGKLEWHNRRDPKRLPLKLSQIEAAMSFSVAKSMV
MQNAGKHYPAPMSAVKTIEAAARLGRDEALQLETASFVPLAQSKEARALVSIFLNDQFVK
SKAKKLAQDSEKPKQAAVLGAGIMGGGIAYQSALKGVPVVMKDINDQSLTLGMNEAAKLL
NKQLERGKLDGLKMAKVLSTIHPTLDYSGIERASVVVEAVVENPKVKAAVLAEAESLLGT
DTVLASNTSTIPINLLASSLKRPENFCGMHFFNPVHRMPLVEIVRGEKTSDKTISRIVSY
ALAMGKTPIVVNDCPGFFVNRVLFPYFSGFSLLLRDGADFRQIDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQSVMAAGFPERMARDYRDAVDVLFDNRRFGQKNQLGFYRYSEDSKGKP
RKEVDEQAISLLADNLKPAHTDFSPQDIIARMMIPMINEVVRCFEEGIIASPAEADMALV
YGIGFPPFHGGPFRYLDTLGTTEYLKMTEQYAHLGPMYQAPEGLRAKAQTNESYYPVAAP
LENFSTGNQA
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccaaggcgaaacactacacctgcactggctcgacggcggtatcgcggagctg
gtgtttgatgccccaggctcggtcaacaaactcgacactcaaactgtcgccagcctgggc
gaagccattgcagtacttgaaaaacagtctgacctgaaaggtctgctgctcagttcggcc
aaaccagcgtttatcgtgggcgcggatatcaccgaatttttatccctgttcaacgcgcca
gccgaaaaactgcatgaatggctggatttcgccaacagcatttttaaccggctggaagac
ctgccggtaccgacactttctgccatcagcggttatgcgctgggcggcggttgcgaatgc
gtgctggcgacagattttcgtatcagcactgccgatgcccggattggcctgccggaaacc
agtttaggaattatgccgggcttcggcggttccgtacgtctgccacgtctgattggtact
gacagtgcgctggaaattatcgccgccggtaaaaatatcagcggaaaagaggccctgaaa
gtcgggctggtcgatgcggtggttgaagccgataaactgcgcgacgctggcatcagcatg
ctgagaaacgccgttgacggcaaactggaatggcataaccgtcgtgatcctaaacgtctg
ccgttgaaactcagccagattgaagcggcgatgagcttcagcgtcgccaaaagtatggtc
atgcaaaatgccggtaaacactatccggcgcccatgagcgcggtgaaaaccatagaagcc
gcggcccgtctgggtcgcgatgaagcgttgcagctggaaaccgccagctttgtgccgctc
gcacaatcaaaagaagcccgcgcactggtcagtattttccttaacgatcagtttgtgaaa
agcaaagccaaaaaactggcgcaagacagcgaaaaaccgaaacaggccgccgtattgggc
gcgggcattatgggcggcgggatcgcctaccagtctgcgctgaaaggcgtgccggttgtg
atgaaagatatcaacgaccagtccctgacgctcggcatgaacgaggctgccaagttgctc
aacaagcaactggagcgcggtaaactcgacggtctgaaaatggcaaaagtgctgtcgacc
attcatccgacgctggattacagcggcatcgaacgagcctctgtggtcgttgaagccgtg
gtcgagaatcctaaagtgaaggccgcggtgctggcggaagcggaatctctgctcggcacc
gataccgttctggcctcgaatacctcgaccattcctatcaatctgttagcgtcttcgctc
aaacgcccggaaaacttctgtggtatgcacttcttcaacccggtgcatcgtatgccgctg
gtcgaaatcgtgcgtggtgagaaaacctcagacaaaacgatttcgcgcatcgtttcttac
gcactggcgatgggtaaaacgcctatcgtggtcaacgactgcccgggattcttcgtcaac
cgcgtactgttcccgtatttctccggtttcagtctgttactgcgtgatggcgctgatttc
cgccagatcgacaaagtgatggaaaaacagttcggctggccgatgggtccggcttatctg
ctggatgtggtcggcatcgacaccgcgcatcacgcccagtccgtgatggccgccggtttc
cctgagcgcatggcacgggattaccgtgacgctgttgatgtgctgtttgataaccgtcgt
tttgggcagaaaaatcaactcggtttctaccgttacagcgaagacagcaaaggcaagccg
cgcaaggaagttgacgaacaggcgatcagtctgctggccgacaacctgaaaccagcacac
actgacttctcaccgcaggacatcatcgcccgcatgatgattccgatgattaacgaagtg
gtgcgctgctttgaggaaggcattattgccagcccggccgaagccgacatggcgctggtc
tacggcatcggattccctcctttccacggcggcccgttccgttatcttgataccctcggc
accactgagtatctgaaaatgaccgaacagtacgcacatctggggccgatgtatcaggca
ccggaagggctacgcgctaaagcgcaaaccaatgaaagttactatccggttgccgctccg
ctggaaaacttcagcaccggtaatcaggcataa
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