Rahnella aceris ZF458: JHW33_15380
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Entry
JHW33_15380 CDS
T07163
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
race
Rahnella aceris ZF458
Brite
KEGG Orthology (KO) [BR:
race00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
race03021
]
JHW33_15380 (rpoH)
Transcription machinery [BR:
race03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JHW33_15380 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
SANT_DAMP1_like
HTH_10
UCR_14kD
HTH_3
Motif
Other DBs
NCBI-ProteinID:
QQN33811
LinkDB
All DBs
Position
complement(3368888..3369745)
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AA seq
285 aa
AA seq
DB search
MTKEMRTLALVPQGSLEAYVRAANAYPMLTAEEERALAERLHYNGDLEAAKELILSHLRF
VAHIARNYSGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKNKQRLGWFSHDEVEHVARELGVTSKDVLEMESRMAAQDM
TFDPTPDDEPRDGAAMAPMLYLQDKSSDFAETIEEDNWDQDATDKLSSAMEGLDERSQDI
IRARWLDDENKSTLQELADKYGVSAERVRQLEKNAMKKLRMAIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagaaatgcgcactttagcattagtaccccaaggtagcctggaagcctatgtt
cgggcggccaatgcctatcctatgctcaccgcagaggaagaacgggcgctggctgaacgg
ctgcattacaacggtgatctggaagcagcgaaagagctgatcctgtctcacctgcgcttt
gttgctcacattgcccgcaactattcaggctacggtttgcctcaggcagaccttatccag
gaagggaatatcggcctgatgaaagcggttcgccgttttaatccggaagtcggtgtccgt
ctggtatcctttgctgtgcattggatcaaagcggaaattcacgaatatgtgctgcgtaac
tggcgcatcgtgaaagtcgctaccaccaaagcgcagcgtaagctgttcttcaacctgcgt
aagaacaaacagcgtctgggctggttcagccacgacgaagtcgagcacgtcgcccgcgaa
ctgggtgtaacgagcaaagatgtgctggaaatggaatcacgcatggccgcacaggacatg
acgtttgatccgacgccggatgatgaaccacgcgacggcgcagcgatggcaccgatgctg
tatctgcaagacaagagttctgactttgcagaaactatcgaagaagataactgggatcag
gacgcaaccgacaaactttcctctgcaatggaaggtctggacgaacgcagtcaggatatc
attcgtgcccgctggttagacgacgaaaacaaatcgaccctgcaggagcttgccgataaa
tacggtgtgtctgcagaacgtgttcgtcagctggaaaagaacgcgatgaaaaaactgcgt
atggcgatcgaagcctga
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