Rahnella aceris ZF458: JHW33_15535
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Entry
JHW33_15535 CDS
T07163
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
race
Rahnella aceris ZF458
Pathway
race03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
race00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JHW33_15535 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
race03019
]
JHW33_15535 (recQ)
03400 DNA repair and recombination proteins [BR:
race03400
]
JHW33_15535 (recQ)
Enzymes [BR:
race01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JHW33_15535 (recQ)
Messenger RNA biogenesis [BR:
race03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JHW33_15535 (recQ)
DNA repair and recombination proteins [BR:
race03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JHW33_15535 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
QQN33836
LinkDB
All DBs
Position
complement(3408909..3410741)
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AA seq
610 aa
AA seq
DB search
MSTAAVINKEELAHQVLRDTFGYQQFRPGQQTIINTALSGRDCLVVMPTGGGKSLCYQIP
ALVMDGLTLVVSPLISLMKDQVDQLMAAGVEAGCLNSTQTREQQLEVMAGCRAGRIKMLY
IAPERLMMGDFLEQLQQWNPAMLAVDEAHCISQWGHDFRPEYRALGQLKLRYPQLPVIAL
TATADEATRNDIVRLLELNDPLIQVSSFDRPNIRYTLVEKFKPLDQLIRFVQDQRGKSGI
IYCNSRAKVEDTAARLQSRGLSVGAYHAGLDNDTRARVQEGFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRTIESYYQETGRAGRDGLPAEAVLLYDPADMAWLRRCLEEKPAGAQ
QDVERHKLNAMNAFAEAQTCRRLVLLNYFGEGKQNACGNCDVCLDPPKRYDGLLDAQKAL
SVVARVGQRFGLGYVVEVLRGSNNQRIREYGHDKLTVYGIGKEHSNEHWTSVVRQLIHLG
LITQNIAMHSALQLTESARPVLRGEIPLQLAVPRIQTLKIKSSASQKTYGGNYDRKLFAK
LRKLRKSLADDNNVPPYVVFNDTTLLEMAEHLPVSASDLLDITGVGQRKLEKFGRPFMAM
IRDHIDNGDE
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
gtgtctacggcggcagtgataaacaaagaagagctggctcatcaggtattacgcgatacc
ttcggctatcagcaattcagaccaggccagcaaactatcatcaataccgccctttctggc
cgggattgtctggtagtgatgccaacaggcggcggtaaatcgctgtgctatcaaattccc
gcgctggtgatggacggcctgacgctggttgtttcgccgctcatctcgctgatgaaagat
caggtcgatcagctgatggccgcaggcgttgaagccggttgcctgaactcaacgcaaacc
cgtgagcaacagctggaagtgatggccggttgccgcgcgggacgtatcaaaatgctgtat
atcgcaccggaacgcctgatgatgggtgatttcctcgagcagctgcaacagtggaatccg
gcgatgcttgccgtggatgaagcccactgtatttcccaatggggccacgatttccgcccg
gaatatcgcgcgctcggccagctgaaactgcgttatccgcaactgccggtgattgccctg
accgcaaccgccgatgaggccacccgtaacgatatcgtccgtctgctggagctgaacgat
ccgctgattcaggtcagcagttttgaccgtccgaatatccgttacacgctggtggaaaaa
tttaagccgctcgatcagctgatccgctttgtacaggatcagcgcggcaaaagcggcatt
atttactgtaacagccgcgccaaagtcgaagacaccgctgcccgtctgcaaagccgcggg
ctgagcgtcggcgcgtatcacgccgggctggataacgacacccgcgcccgcgtgcaggaa
ggtttccagcgcgacgacctgcaaattgtggtcgccaccgtcgccttcgggatgggcatc
aacaaacctaacgtgcgttttgtggtgcactttgatattccacgcaccatcgagtcttat
tatcaggaaacgggccgggcagggcgtgacggcctgcctgccgaagcggtgctgctttac
gatccggctgatatggcgtggctgcgccgctgtctggaagagaaaccggcgggcgctcag
caggatgttgaacgccataagctgaatgccatgaatgcgtttgcggaagcgcaaacctgc
cgccgtctggtgctgctcaattacttcggtgaaggcaaacagaacgcctgcggtaactgc
gatgtgtgtcttgacccgccaaaacgctatgacggtttgctggatgcgcagaaagcgctg
tcagtggttgcgcgcgtcggacaacgttttggcttagggtatgtggtcgaagtgctgcgc
ggttcgaataaccagcgtatccgcgaatacggccacgacaagctgactgtgtacggcatc
ggcaaagaacacagcaacgaacactggaccagcgtagttcgccagctgatccatctcggg
ctgattacgcaaaatattgccatgcactcggcgttacaactgacggaatcggcgcgtccg
gttttacggggcgaaatcccgttgcagttggccgtgccgcgtattcagacgctcaaaatt
aaaagcagtgccagccagaaaacttacggcgggaattacgatcgtaagttgtttgctaaa
ttgcgtaaactgcgtaagtcactggcggatgacaataatgtgccgccgtacgtggtattt
aacgacacgacgctgctggaaatggctgaacatctgcccgtcagcgcgagcgatttgctg
gacatcacgggtgttggtcagcgtaagctggagaaattcggcaggccatttatggcgatg
atccgcgatcacatcgataacggcgacgaataa
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