Rahnella aceris ZF458: JHW33_15570
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Entry
JHW33_15570 CDS
T07163
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
race
Rahnella aceris ZF458
Pathway
race03420
Nucleotide excision repair
race03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
race00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JHW33_15570 (uvrD)
03430 Mismatch repair
JHW33_15570 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
race03400
]
JHW33_15570 (uvrD)
Enzymes [BR:
race01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JHW33_15570 (uvrD)
DNA repair and recombination proteins [BR:
race03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JHW33_15570 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
JHW33_15570 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QQN33842
LinkDB
All DBs
Position
complement(3416476..3418638)
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AA seq
720 aa
AA seq
DB search
MDVSDLLDSLNEKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLLAVEKCSPYSIMAV
TFTNKAAAEMRHRIDQLIGASQGGMWIGTFHGLAHRLLRAHHLDANLPQDFQILDSDDQI
RLIKRLIKALNIDDKQWPPRQAMWYINGKKDEGLRPQHVETYNNPVEATWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNLMVDEFQDTNSIQYAWIRLLAGDN
NNVMIVGDDDQSIYGWRGAQVENIQRFLKDFPNAQTIRLEQNYRSTSTILKAANSLIENN
NGRMGKNLWTEDGEGEPISLYCAFNELDESRFVVNRIKTWQDNGGALKDCAILYRSNAQS
RVLEEALLQMAMPYRIYGGQRFFDRQEIKDALAYLRLMSNRNDDAAFERVVNTPTRGIGD
RTLDVVRQTARDRQMTMWQATRALLQEKVLAGRAASSLQRFTELVDALAHETSDMPLHVQ
TDRVIKDSGLFIMYEQEKGEKGQARIENLEELVTATRQFSYQDEDEDLMPLQAFLSHAAL
EAGEGQADANQDATQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLEEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVSHRPSRFVGELPEDCVEEVRMRASVSRPMSNRSVG
TPTSVSDTGFKLGQRVVHPKFGEGTIVNMEGSGEHSRLQVAFPGEGIKWLVAAYARLEAV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctgacctgctcgacagcctgaatgaaaaacaacgtgaagccgtggccgcg
ccgcgcagcaatctgttggtgctggccggagcaggcagtggcaaaacccgcgtgctggtt
caccgcattgcgtggttgctggcggtagaaaagtgctcgccgtattctattatggccgtc
acatttaccaataaagcggcggcagaaatgcgccaccgtatcgaccagctgatcggcgcc
agtcagggcggcatgtggattggtaccttccacggcctcgcgcaccgtttgctgcgtgca
caccatttagacgccaatttgccacaggatttccagatcctcgacagtgacgaccagata
cgtctgatcaaacgcctgatcaaagccctgaacatcgatgataaacaatggcccccgcgt
caggcgatgtggtacatcaacggcaaaaaagacgaaggtctgcgaccgcagcatgtcgaa
acctacaacaatcccgttgaagcgacctggttacgcatttatcaggcctatcaggaagct
tgtgaccgtgccgggctggtggattttgccgagctgttgctgcgcgcccacgaactctgg
ctgaacaagccgcatattttgcagcattaccgcgaacgttttaccaacctgatggtggac
gaattccaggacaccaacagcattcagtacgcgtggatccgcctgctggcaggtgacaac
aataatgtgatgatcgtgggtgatgatgaccagtcgatttacggctggcgcggtgcgcag
gttgaaaacatccagcgcttcctgaaagatttcccgaatgcacaaaccatccgtctggag
cagaactaccgttcaaccagcaccatcctgaaagccgccaactcactgattgaaaacaac
aatggccgtatgggtaaaaacctgtggaccgaggacggcgaaggcgaaccgatttcactc
tattgcgcgttcaacgaactggatgaatcgcgctttgtggttaaccgcatcaaaacctgg
caggacaacggcggtgcgctgaaagattgcgccattctttaccgcagcaacgcccagtcg
cgtgtgctggaagaagccttattgcagatggcgatgccataccgtatttacggcgggcag
cggttcttcgaccgtcaggaaatcaaagatgcgctggcgtatctgcgattgatgtcgaac
cgcaatgacgatgccgcttttgagcgcgtggtgaacacaccgacgcgcggcatcggcgac
cgcacgctggatgtggtgcgccagacagcacgtgatcgtcagatgaccatgtggcaggcc
acccgcgcgctgttgcaggaaaaagtgctggcaggtcgtgcggcatcttcactgcaacgc
ttcaccgaactggttgacgcactggcgcatgaaacctcagatatgccgctgcacgtgcag
actgaccgggtgattaaagattccggcctgttcatcatgtatgagcaggaaaaaggcgaa
aaagggcaggcgcgaatcgaaaacttagaggaactggtgacagcaacacgccagttcagc
tatcaggatgaagacgaagatctgatgccgctgcaggcgtttctgtcgcatgccgcgctg
gaagcgggcgaagggcaggcggatgccaatcaggatgcgacgcagttaatgacactacac
tcggcgaaagggctggagttcccgcaggtgtttatcgtcggcatggaagagggcatgttc
ccgagccagatgtcgctggaagaaggcggacgtctggaagaagaacgccgtctggcctat
gtcggcgtcacccgcgctatgcaaaaattgaccctgacctacgcggaaacccgccgttta
tacggcaaagaagtgtctcatcgcccgtcacgttttgtcggcgaactgccggaagattgt
gtcgaagaagtcaggatgcgcgccagtgtgtcacgcccgatgagcaaccgcagcgtcggc
acgccaaccagcgtcagcgacaccggcttcaaactcggccagcgcgttgtgcatcctaaa
ttcggcgaaggtactatcgtcaatatggaaggcagcggggaacacagccgtctgcaggtg
gcgttcccgggcgaagggattaagtggctggttgccgcctacgcccgcctcgaagccgtc
tga
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