Rahnella aceris ZF458: JHW33_15590
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Entry
JHW33_15590 CDS
T07163
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
race
Rahnella aceris ZF458
Pathway
race00300
Lysine biosynthesis
race00470
D-Amino acid metabolism
race01100
Metabolic pathways
race01110
Biosynthesis of secondary metabolites
race01120
Microbial metabolism in diverse environments
race01230
Biosynthesis of amino acids
Module
race_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
race00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JHW33_15590 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JHW33_15590 (dapF)
Enzymes [BR:
race01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
JHW33_15590 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
QQN33846
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Position
complement(3421060..3421884)
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDAVTQNVYFSPELIRRLSDRHRGVGFDQLLVVEPPYDPELDFHY
RIFNADGSEVAQCGNGARCFARFVRIKGLTNKRDIRVSTQTGRMVLTVTEDEEVQVNMGE
PVFEPQQVPFRAAKPEKTYILRAEERTVFCGVVSMGNPHCVLQVDDVLTAEVEVLGPMLE
SHDRFPERVNVGFMQILSPESVKLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVQV
ELPGGSLDIRWKGPGHPLYMTGPATHVYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctccaaaatgcacggcctgggtaacgattttatggtcgttgatgccgtcact
caaaatgtctatttttctcccgagttgatccgtcgtttgtctgaccgtcaccgtggcgta
ggttttgaccagttactggtggtggaacctccttacgatcccgaattagactttcattac
cgtatttttaacgcggacggcagtgaagtcgcgcagtgtggtaatggtgcgcgctgtttt
gcccgctttgtccgcattaaaggtctgacaaacaaacgtgatatccgtgtcagcacgcag
accggccgcatggtgctgactgtcaccgaagatgaagaagtgcaggtcaacatgggcgag
ccggttttcgagccgcaacaggtgcctttccgtgcagcgaaaccggaaaagacctatatt
ctgcgtgcagaagagcgcacagtattttgcggtgtggtgtcgatgggaaacccgcattgc
gtattacaggtggatgatgtgctgacagcagaagtcgaggttctcgggccgatgctggaa
agtcatgaccgttttcctgagcgtgtgaacgtcggtttcatgcagatcctcagcccggaa
agcgtaaaattgcgcgtgtatgagcgcggcgccggcgaaacacaggcatgcggaagtggt
gcctgcgcggctgttgcggttggcattcagcaaggtttactcgcagaagaagttcaggtg
gaactgccgggaggcagcctcgacattcgctggaaagggccgggtcatccgctttatatg
accggacctgccactcatgtttacgacggatttattcatctatga
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