Rahnella aceris ZF458: JHW33_16115
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Entry
JHW33_16115 CDS
T07163
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
race
Rahnella aceris ZF458
Pathway
race00541
Biosynthesis of various nucleotide sugars
race01100
Metabolic pathways
race01250
Biosynthesis of nucleotide sugars
Module
race_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
race00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
JHW33_16115 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
race01005
]
JHW33_16115 (rfaD)
Enzymes [BR:
race01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
JHW33_16115 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
race01005
]
Core region
JHW33_16115 (rfaD)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
ThiF
KR
Motif
Other DBs
NCBI-ProteinID:
QQN33938
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Position
3536222..3537154
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AA seq
310 aa
AA seq
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MIIVTGGAGFIGSNIIKSLNDMGYRDILVVDNLKDGTKFVNLVDLDIADYCDKEDFIASI
VAGDDLGDIDAIFHEGACSSTTEWDGKYMMDNNYQYSKDVLHYCLDRSIPFLYASSAATY
GSQSTSFVEERKYEQPLNVYGYSKFLFDQYVREILPHAESQICGFRYFNVYGPREGHKGS
MASVAFHLNNQIKAGENPKLFSGSEGFKRDFIYVGDVAAVNLWFWQNGVSGIFNCGTGRS
ESFQAVADAVVAYHKSGDIEYIPFPEKLKGRYQSFTQADMTALRNAGYDKPFKTVAEGVT
EYMSWLNRTV
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgataatcgtcactggcggcgctggttttatcggcagcaatattattaaatcgctcaat
gatatgggataccgcgatattctggtggtggataatctgaaagatggcaccaagttcgtc
aatctggtggatctggatattgcggattattgcgacaaagaagattttatcgccagtatc
gtggccggcgacgatctgggtgatatcgacgccattttccacgaaggcgcatgctcttcc
actaccgagtgggacggcaagtacatgatggataacaactatcagtactctaaagatgtc
ctgcattattgtttagatcgcagcattcccttcctttatgcgtcttccgcagccacttat
ggtagccagagcaccagctttgttgaagagcgtaaatacgaacaaccgctgaacgtctat
ggttactctaagttcctgtttgaccagtatgttcgcgaaattctgccgcacgctgaatct
caaatttgtggtttccgttatttcaacgtttacggaccgcgtgaaggccataaaggcagc
atggcgagcgtagcgttccatctgaataatcagatcaaggccggggagaacccaaaactg
ttctcgggcagcgaaggcttcaaacgcgattttatctacgtgggtgatgtggcagccgtg
aacctgtggttctggcaaaacggtgtttcgggcatttttaactgcggtaccggacgttcg
gaatccttccaggccgtggcagatgctgtcgtggcataccacaagtctggcgatatcgaa
tacattccattcccggaaaaactcaaaggccgttaccagtccttcacacaggccgacatg
acggccctgcgtaacgccggttacgacaaaccgttcaaaacggttgccgaaggtgttacg
gaatacatgagctggcttaaccgcacagtttaa
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