Rahnella aceris ZF458: JHW33_16360
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Entry
JHW33_16360 CDS
T07163
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
race
Rahnella aceris ZF458
Pathway
race03030
DNA replication
race03410
Base excision repair
race03420
Nucleotide excision repair
race03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
race00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JHW33_16360 (polA)
03410 Base excision repair
JHW33_16360 (polA)
03420 Nucleotide excision repair
JHW33_16360 (polA)
03440 Homologous recombination
JHW33_16360 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
race03032
]
JHW33_16360 (polA)
03400 DNA repair and recombination proteins [BR:
race03400
]
JHW33_16360 (polA)
Enzymes [BR:
race01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JHW33_16360 (polA)
DNA replication proteins [BR:
race03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JHW33_16360 (polA)
DNA repair and recombination proteins [BR:
race03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
JHW33_16360 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JHW33_16360 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QQN33986
LinkDB
All DBs
Position
complement(3590976..3593780)
Genome browser
AA seq
934 aa
AA seq
DB search
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLLLQYTPSHVAV
VFDAKGKTFRDELFEQYKSHRPPMPDDLRSQIEPLHQMVKAMGLPLLVVSGVEADDVIGT
LALEAELAGHAVLISTGDKDMAQLVTPGVTLINTMNNAILGPDEVVEKYGVPPSLIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGIGGLDALYADLDKVSTLSFRGAKTMAAKLADNK
DVAYLSYQLATIKTDVKLDLTCAELTVSEPDADELHKLFGRYEFKRWLADVESGTWLSGK
KSAGKAPAAAKKSAQAEDTTSAAVIEPNQLSQDGYVTILDQATLDEWIGYLKASEVFAFD
TETDGLDTLTANLIGLSFATEAGKAAYLPVAHDYLDAPVQLDRDEVLKQLKPILEDEKQL
KVGQNLKFDRGVLLRYDIELKGIAFDTMLESYVLDSVSGRHDMDSLADRYLGHKTVSFEE
IAGKGKNQLTFNQIALEQAAPYAAEDADVTLQLHQALWPRIAESESLKTVFTDIEMPLVP
VLSHIERTGVLIDQNILAAHSKELAIRLNELENKAHELAEEPFNLSSTKQLQAILYEKQK
LPILKKTPGGAPSTNEEVLAELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPQSGRV
HTSYHQAVTATGRLSSSDPNLQNIPVRNDEGRRIRQAFIAPKDYIILAADYSQIELRIMA
HLSKDEGLLKAFAEGKDIHRATAAEVFGTPLEKVSGEQRRSAKAINFGLIYGMSAFGLSR
QLNIPRKESQRYMDLYFERYPGVLEYMERTRTQASEQGYVETLDGRRLYLPDIKSSNAMR
RKGAERAAINAPMQGTAADIIKRAMISVADWLKQPYAPRARIIMQVHDELVFEVHKDDVE
VASEKIRNLMEASMTLAVPLKVDVGTGENWDQAH
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatagcagaaaaccccttaatcctggtagacggttcgtcttacctttatcgc
gcctatcatgcgtttcctccgctgaccaactctgcgggtgaaccgaccggtgcgatgtac
ggtgtgcttaacatgttgcgcagtttattgctgcaatacacaccaagccatgtcgctgtg
gtttttgacgcgaaaggcaaaaccttccgtgacgaacttttcgaacagtacaaatctcac
cgtcctccgatgccggatgacctgcgctctcaaattgagcctcttcaccaaatggtcaaa
gcaatggggttgcctttgctggtggtctctggtgtagaagcggacgacgtaatcggtacg
ctggcactcgaagctgaactggcgggtcatgctgttctgatcagcaccggtgataaagat
atggcgcagctcgtgacaccgggcgtgacattaattaatacgatgaacaacgcgattctg
gggccagatgaagttgtcgagaagtacggtgttccgccttcgctgatcatcgatttcctc
gccctgatgggtgactcctcggacaatattccaggcgtgccgggcgtgggggagaaaacc
gcacaagccttgttacaaggcattggtggtcttgatgcgttgtatgccgatcttgataaa
gtatcgacactcagtttccgcggcgccaaaaccatggccgccaaactcgctgataataaa
gacgtcgcctatctctcttaccagctggcgaccattaaaactgacgtgaagctggattta
acctgtgcagagctgacggtttctgaacctgatgctgatgaactgcacaagctttttggt
cgctatgaattcaaacgctggctggctgatgttgaatccggtacctggctgagcggtaaa
aaatcggcaggtaaagcgccggcagcagcgaagaaaagcgcacaggctgaagacacaact
tcagcagcagtgatcgaacctaaccagctttctcaggacggttacgtcaccattttggat
caggcgacgctggatgaatggatcggttatctgaaagcctctgaggtgtttgccttcgat
acagaaacggatggtctggatacgctgaccgccaatctgattggcttatcttttgctaca
gaagcaggtaaagcagcctatttaccggttgctcatgattatctggatgcgccggtacag
ttggatcgtgatgaagtattgaaacagctcaagccgatactcgaagatgaaaagcagctg
aaagtgggtcagaacctgaaattcgaccgcggcgtgttactgcgttatgacatcgaatta
aaaggcattgcctttgataccatgctcgagtcctatgtgctcgacagcgtatctggccgc
catgatatggacagcctggccgatcgctatctcggccataagaccgtcagttttgaagag
atcgcaggtaaaggcaagaaccagctgaccttcaaccaaatcgcgctggagcaagcggcg
ccttatgcggcggaagatgctgatgttacattgcaattgcatcaggcactgtggcctcgg
attgcggaaagcgaatccctgaagactgtcttcacggatatcgaaatgccgctggtacct
gtgctgtctcatatcgagcgcactggcgttctgattgatcagaatatcctcgccgcccac
tcaaaagaactggctatccgtctgaatgagctggaaaacaaggcgcatgagctggcagaa
gaacctttcaacctgtcttcgaccaaacaattgcaggctattctgtatgaaaaacagaaa
ttaccgattctgaagaaaacgccgggtggcgcgccatcgactaatgaagaagttctggct
gagctggctctggattacccgctgccaaaagtcattcttgaatatcgtggtctggcaaaa
ctgaaatcgacctataccgataaactgccattgatgatcaatccgcagtccggacgtgtg
cacacgtcttatcatcaggcagtgactgccaccgggcgtctatcttccagtgatccaaac
ctgcaaaacattccggtgcgtaatgacgaaggtcgccgcatccgtcaggcgtttatcgcg
ccgaaagactacatcattctggctgccgactactcgcagattgaactgcgtatcatggcg
catttatctaaggatgaaggtttgctgaaagcgttcgccgaggggaaagatatccaccgc
gcgactgccgcagaagtcttcggtacgccgctggagaaagtatccggtgagcaacgccgc
agtgcgaaagcgattaacttcggcctgatttatggcatgagcgcctttggtctgtcgcgc
cagctaaatattccgcgcaaagaatcccagcgttatatggatttgtactttgagcgctat
ccgggcgtgctggaatacatggaacgcacccgcactcaggcgtctgagcagggttacgtt
gaaacgctggatggtcgccgtctgtatctgccagacattaagtccagtaacgccatgcgc
cgtaaaggtgcggagcgtgcagcgatcaacgccccgatgcaaggaacggcagcggatatt
atcaagcgtgcgatgataagcgtcgctgactggctgaaacaaccgtatgcgccgcgtgct
cgcattatcatgcaagtacacgatgaactggtgtttgaagtgcataaagatgatgtggaa
gtggcaagcgaaaaaatccgtaatcttatggaagcaagcatgacgctggccgttccactg
aaagtagatgtgggcactggcgaaaactgggatcaggctcactaa
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