Rahnella aceris ZF458: JHW33_17090
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Entry
JHW33_17090 CDS
T07163
Name
(GenBank) LysR family transcriptional regulator
KO
K21645
LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
Organism
race
Rahnella aceris ZF458
Brite
KEGG Orthology (KO) [BR:
race00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
race03000
]
JHW33_17090
Transcription factors [BR:
race03000
]
Prokaryotic type
Helix-turn-helix
LysR family
JHW33_17090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
Replic_Relax
Motif
Other DBs
NCBI-ProteinID:
QQN34125
LinkDB
All DBs
Position
complement(3746404..3747330)
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AA seq
308 aa
AA seq
DB search
MELKWFEDFLSVSQCYSFTRAASERNITQSALSRRIKQLEEWLGVPLFDRKTYPIRLTPE
GQDFLHTAADLVFSMTQLRSDLRERHAQKHAIVHFAALNTLSLTFFPDWINQIDPSHQYG
YIRLCDQQPSFSGNISLLLDGETDFLLTYAHDSVPLMKQLERFPYIELGKENALAVCAPD
DDGKPLFPLSPFGGTRVQLPYLSYGNRSFFAHALSALFASRPLPLKPVYENPMCSGLKAM
TISGCGVSWLPTSLICEELANGSLIRAGERSWDIQASIRLYRLEKFRTPQAERLWNKASQ
LHQTRAVA
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggaactgaagtggtttgaagattttctcagtgtgtctcagtgctatagctttacgcga
gccgccagtgaaagaaacatcacccagtccgcgctgagccgacgaattaagcaactggaa
gaatggcttggcgtgccgctttttgaccgaaaaacctacccgatacgcctgacgccggaa
ggccaggacttcctgcatactgcggcagatctggtgttttccatgacacaactgcgcagc
gacctgcgtgagcgccatgcgcagaagcacgccatcgtgcattttgccgcgctcaatacg
ctctccctgacctttttccccgactggatcaaccagatcgacccgtcgcatcagtacggc
tacattcgtttgtgcgatcagcagccgtcattcagcggcaatatttccctgctgctggat
ggcgaaacggattttctgctgacctacgcccatgattccgtcccgctgatgaaacagctc
gaacgctttccctatattgaactgggaaaagagaatgcgctggccgtttgtgcaccagac
gatgacggcaagcccctgttcccgctaagcccctttggcggcacccgcgtccagcttcct
tatctcagttacggcaatcggtccttttttgcccacgcgctgagtgccctgtttgcgtcg
cgcccgctgccgctgaagccggtgtatgaaaatccgatgtgcagcggcctgaaagcgatg
accatttccggctgcggcgtgtcgtggttgcccaccagcctgatctgcgaggaactggcg
aacggctcgcttatccgcgccggagaacgaagctgggatattcaggccagcatccgtctt
taccggctggaaaaattccgtaccccgcaggccgaacggctgtggaataaagccagccag
ttgcaccagacccgcgccgtcgcctga
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