Rahnella aceris ZF458: JHW33_18725
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Entry
JHW33_18725 CDS
T07163
Symbol
mscM
Name
(GenBank) miniconductance mechanosensitive channel MscM
KO
K22051
miniconductance mechanosensitive channel
Organism
race
Rahnella aceris ZF458
Brite
KEGG Orthology (KO) [BR:
race00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
race02000
]
JHW33_18725 (mscM)
Transporters [BR:
race02000
]
Other transporters
Pores ion channels [TC:
1
]
JHW33_18725 (mscM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MscS_porin
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
QQN34428
LinkDB
All DBs
Position
complement(4093884..4097252)
Genome browser
AA seq
1122 aa
AA seq
DB search
MRLIPALLMSLLLSLPLMAGAAPTEDQLKQELKQAEANKEMANQTQVVEALQSALNWLNE
ASVSAGRTAEYQKVIDDFPKLTQALRQELRNQPDKPPALDNSISAAQLEQQILQVSSQQL
EETRQLRQEQDRSRDISDSLSLIPQQQSEARNALSDIDQRIQAATAAATSSPLAQAQLSA
LQAESAARKAKVDELELAQLSANNRQELSRMRTDLYKKRADFLDQQLQVLRNTLNNQRQQ
EAEQALEKTELLAEQSGELPHSISQQLQANRELSLALNQQAQRMDLISSQQRQAAAQTQQ
VRQAINTIREQAQWLGASNLLGETLRAQVARLPDMPKPQQLDRDMGQLRVQRLHYEDLLD
KQAIYRQARQDDGKPLTTDQQKILDAQLRTQRDLLNSLLSGCDTQILELTKLKVANSQLV
EALNDVHDAAHRYLFWVADVSAIGISYPVQVAHDLKRLVSLDSLSQLGGASMMMVTSKET
LLPLFGALILVIISISSRKHYYAFLERASSKVGKVTQDHFSLTLRTVFWSILVAMPLPVL
WAALGFGLQSAWPYPIAVAIGDGVTATLPILWAFMVSAALAHPQGLFVAHFGWPQRAVSR
ALRYYALSIWVLVPLIMALITFDNLNDREFSNTLGRLCFVILCLVVALVTNSLKRAGIPL
YHDKRGNSENIINKTLWWMLLGAPIVAALASLMGYLATSQALLARLETSVAIWFVLLVIY
HIIRRWMLIQRRRIAFERAKQRRAEMLNQRARGEEDGHQISTSNEGTVEIEEPVVDLDAI
SAQSLRLVRSLLTLIALISVIFLWSEIHSAFSFLENIHLWQVASTVQGVESMQPITLGSV
LIALLVLIITTQLVRNLPALLELALLQHLDLTPGTGYAVLTVTKYVLLLIGGLTGFSLIG
IEWAKLQWLVAALGVGLGFGLQEIFANFISGLIILFEKPIRIGDTVTIRNLTGSITRINT
RATTIADWDRKEIIVPNKAFITEQFINWSLSDSVTRVVLTVPAPSEANSEEVTEILLNAA
HRCSLVLDMPAPEAYLVDLQQGIQIFELRMHAAEMAHRMPLRHEIHQLILAGFREHGITL
PFPPFQVRMETLHRAQNGNNATFTSSSGSGRSGNSSRSPGDL
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcctgatccccgccctgctgatgagtttactgctgtccctgccattgatggcgggt
gcggccccgactgaagatcagctcaaacaggagctgaaacaggcggaagccaacaaagaa
atggccaatcagacgcaggtggttgaggcgctgcaaagcgcactcaactggctgaatgaa
gccagtgtttcagccgggcgcacggcggaatatcaaaaggtcattgatgattttccaaaa
ctgacgcaggcactgcgccaggaattgcgaaatcagcctgacaagccacccgcgctggat
aacagcatctcagccgctcagctcgagcagcaaattctgcaagtcagcagccagcaactg
gaagaaacccgccagttacgtcaggagcaggatcgctcccgcgacatcagcgactcacta
agtctgatcccgcaacagcaatccgaagcccgcaacgcgctgagtgacatcgatcagcgc
atacaggcggcgacagcggcggccacctcctcacccctggcgcaggcgcaactcagcgca
cttcaggccgaatccgcagcgcgcaaagcgaaggtggatgaactggaactggctcagctt
tctgccaataaccggcaggaattgtcgcggatgcgcaccgatctctacaaaaagcgcgcc
gattttcttgatcagcaattacaggttttacgcaacacgctgaataatcaacgtcagcag
gaagccgaacaggcactggaaaaaaccgagctgctggccgaacagagtggcgagttgcca
cactcgatcagtcagcagttacaggcaaaccgcgagttgtcgctggcgctgaatcagcag
gcgcagcggatggacctgatttcctctcaacaacgtcaggccgctgcacagactcagcag
gtacgtcaggcgatcaataccattcgcgaacaggcgcagtggcttggcgcgtctaattta
cttggcgaaacgctgagggcgcaggttgcgcgtctgccggatatgccaaaaccgcaacag
cttgaccgcgatatgggccagttgcgcgttcagcgtctgcactatgaagatttgctggat
aagcaggctatttaccgtcaggcgcggcaggacgatggcaaaccgctcaccacagatcag
caaaaaattctggatgcgcagttgcggacgcaacgtgatttgctcaattccctgctctcg
ggttgcgatacccaaattcttgaactgaccaagctgaaagtggcaaacagccaactggtg
gaggcgctgaatgacgtacatgacgccgcccaccgttatctgttctgggtggcagacgtc
agcgccatcggcatttcttacccggtgcaggtcgcgcatgacctgaaacggctggtctcg
ctggattcgctcagccagcttggcggtgcgtcgatgatgatggtcaccagcaaagaaaca
ctgctgccgctgtttggcgcactgattctggtgattatcagcatcagttcccgcaagcac
tattatgcatttctggaacgtgccagcagtaaagtcggcaaagtcacgcaggatcatttc
tcgctgaccctgcgtaccgtgttctggtcaattctggtggcgatgccgttacctgtgctg
tgggccgcgctgggattcgggctgcaaagtgcctggccgtatccgattgcggtggcgatc
ggcgatggcgtcaccgcgacgttgccaatcctgtgggcgtttatggtcagcgccgcgctg
gcacatcctcagggattgtttgtggcacacttcggctggccgcagcgtgcggtgtcaagg
gcactgcgctattacgcgctgtcgatctgggtgctggtgccgctcattatggcgctgatt
accttcgataatctcaacgatcgcgagttctctaatacgctggggcgtctgtgcttcgtg
attctgtgtctggtggtcgcactggtcaccaatagcctcaaacgcgcgggcattccgctg
tatcacgataaaagaggcaacagcgaaaacatcattaacaagacgctgtggtggatgctg
ctgggcgcaccgattgtcgctgcgctggcttcactgatgggctacctcgcgacctcacag
gcgctgctggcccgcctggaaacctcggtcgccatctggttcgtgttgctggtgatttat
cacattatccgccgctggatgctgattcagcgacgtcgtatcgccttcgaacgcgccaag
cagcgccgtgcggaaatgctgaatcaacgcgcccgcggtgaggaagatggccatcagatc
agcaccagcaatgaaggcacggtcgagattgaggaaccggtggtggatctggatgccatc
tctgcccagtcgctgcggctggtgcgttctctgctgacgttgatcgcgctgatctcggtg
atcttcctgtggtctgaaatccactcggccttctctttcctggaaaatattcatctctgg
caggttgcgtctacggttcagggcgtggaaagcatgcagccgatcaccctcggatcggtg
ctgatcgcccttctggtgctgattatcaccacgcaactggtgcgtaatctgcccgcgttg
ctggaactggcgctgctgcaacacctggatctgacgccgggtaccggctatgccgtactg
accgtcaccaaatacgtattgctgctgattggcggcctgaccggtttctcgctgatcggg
atcgagtgggcaaaactgcaatggctggtggcggcactcggtgtcggtctcggcttcggt
ttgcaggagatcttcgctaactttatttccggcctgattatcctgtttgaaaaaccgatc
cgtatcggcgataccgtaacgatccgcaacctgaccggcagtatcaccaggatcaacacc
cgtgccacgacgatcgctgactgggaccgcaaggagattatcgtgccgaacaaggccttt
atcaccgagcagttcatcaactggtcgctgtcggattccgtcacgcgtgtggtgctaacc
gtgcctgcaccgtcggaagccaacagtgaagaagtgacagaaattctgctcaacgctgcg
catcgctgttcgctggtgctggatatgcctgcgccggaagcctatctggtggatctccag
caggggattcagattttcgagctgcgtatgcatgccgctgaaatggcgcaccgtatgccg
cttcgccatgaaattcaccaactgatcctggctggattccgcgagcatggcattacactg
ccattcccgccattccaggtgcgtatggaaacactgcaccgcgcgcaaaatggcaataac
gcgacctttaccagcagcagcggaagtggccgcagcggaaacagttcgcgctcaccgggc
gatttgtaa
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