Rahnella aceris ZF458: JHW33_20015
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Entry
JHW33_20015 CDS
T07163
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
race
Rahnella aceris ZF458
Brite
KEGG Orthology (KO) [BR:
race00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
race03016
]
JHW33_20015 (truD)
Enzymes [BR:
race01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
JHW33_20015 (truD)
Transfer RNA biogenesis [BR:
race03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JHW33_20015 (truD)
Prokaryotic type
JHW33_20015 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QQN37347
LinkDB
All DBs
Position
4366698..4367744
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AA seq
348 aa
AA seq
DB search
MDMSRLTWLLGEPVATGLLKANPEDFIVEEDLGFEPDGEGEHLLVRIRKNGCNTQFVAEQ
LARFAKVHPRDVSYAGLKDRHAVTEQWFCLHLPGKTDPDLSQFDLEGCEVVRASRHRKKM
RIGTLKGNAFTLVLRQVSDMADVEARLEKITQQGVPNYFGTQRFGRGGNNLVQAKRWATN
EARPKERAKRSFYLSASRSAMFNIVASQRLADGTVRQPMLGDALQLSGRGSWFVAKTEEF
ESLLPRVENGELLVTAPLPGDGPLGTLEDAEAYELACLNGQEDLLSLLKRERVEPARRAI
MLQPLQMQWQRWDDVTLELKFWLPAGSYATSVVRELMNLDESDADITE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atagatatgtcccgtctcacctggttgctgggcgagcctgttgccaccggcctgctgaaa
gccaatcccgaagactttattgtcgaagaggatctgggttttgagccggatggcgaaggt
gaacatctgttggtgcggatccgcaaaaatggctgtaacacgcagtttgtcgcggaacaa
ctggcgagatttgccaaagtgcatccgcgcgatgtcagttatgccggtctcaaagaccgc
catgccgttaccgaacaatggttttgcctgcatctgccgggcaagactgatcccgattta
agccagtttgatctcgaaggctgcgaagttgtccgcgcctcacgccatcgcaaaaagatg
cgtatcggtacgctgaaaggcaacgcgtttacgctggtgctgcgtcaggtaagcgatatg
gctgatgtcgaggcgcgtctggaaaaaatcacccaacagggcgtaccgaactatttcggc
acccagcgttttggccgtggtggcaataatctggtgcaggcgaaacgctgggcaaccaat
gaagcccgtccgaaagaacgcgccaaacgcagcttctatctttccgccagccgcagtgcg
atgttcaatatcgtcgccagccagcgtctggccgatggcaccgtacgtcagccgatgctg
ggcgatgccctgcaactgagtggccgtggcagttggtttgtggcgaaaaccgaagagttc
gaatcgctgctaccgcgcgttgaaaacggtgaattgctggtaaccgcaccattgccggga
gatggcccgctgggcacactcgaagacgctgaagcctatgagctggcctgtctgaacggt
caggaggatttactgtcgctgcttaaacgtgagagggtcgaaccggcacgtcgtgccatc
atgctgcaacctttgcagatgcaatggcagcgctgggatgatgttactctggaactcaaa
ttctggttaccggccggcagttatgccaccagcgtggtgcgtgaactgatgaatctggat
gaaagtgatgcggatattactgagtaa
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