Rahnella aceris ZF458: JHW33_21075
Help
Entry
JHW33_21075 CDS
T07163
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
race
Rahnella aceris ZF458
Pathway
race03030
DNA replication
race03430
Mismatch repair
race03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
race00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JHW33_21075 (dnaE)
03430 Mismatch repair
JHW33_21075 (dnaE)
03440 Homologous recombination
JHW33_21075 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
race03032
]
JHW33_21075 (dnaE)
03400 DNA repair and recombination proteins [BR:
race03400
]
JHW33_21075 (dnaE)
Enzymes [BR:
race01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JHW33_21075 (dnaE)
DNA replication proteins [BR:
race03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JHW33_21075 (dnaE)
DNA repair and recombination proteins [BR:
race03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JHW33_21075 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QQN34847
LinkDB
All DBs
Position
4589658..4593140
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFIHLRVHSDYSMVDGLAKVGPLVKCAASLGMPALAITDFTNLCGLVKFYGAAHGA
GVKPIIGADLNVQSEILGDELAQLTVLAMNNQGYQNLTLLISRAYQRGYGAAGPIVDLEW
LAELNEGLILLSGARMGDVGKFLTRGNDLQVSQCLDFYQQYFPDRYYLELIRTGRAEEEN
YLHAAVALATERGLPVVATNDVRFMVPTDFDAHEIRVAIHDGFTLDDPKRPRNYTSQQYM
RSEDEMCELFEDLPEALQNSVEIAKRCNVTIRLGEYFLPQFPTGDMTTEDFLVEKSKIGL
EERLEFLFPDPEVRAQRRPEYDERLDIELKVINQMGFPGYFLIVMEFIQWSKDNSVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDRVIDHVSE
MYGREAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFAAEPQ
LPEIYEADEEVKSLIDMARQLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDAEGNHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALEMINARRAKAGEAPLDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLKPDSFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDIQWQHESLKPVLEPTYGIILYQEQVMQIAQVLAGYSLGGADMLRRAMGKKNPVEM
AKQRGGFEDGAKSRGIDGELAIKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDEGEIVYGIGAIKG
VGEGPIEAIIEARNEGGYFKELFDLCARADVKKLNKRILEKLIMSGAFDRLGPHRAALMS
SLSDALKAADQHAKAEAIGQVDMFGVLAEAPEQVEKSYANVMPWPEQTVLDGERETLGLY
LTGHPITQYLKEIERYGGGQRLKDMHPTERGKMTVAVGLVLAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTEALEKFQHLLEKDRILIATGQVSFDDFSGGLKMMARDVMDISEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRENARARLRFGASWRVTPTD
KLLLDLRGLVGTEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacctcgttttattcatctgcgtgtacatagcgactattccatggtggatggg
cttgcgaaggtcggtccgctggtgaaatgcgcagcgtcactcggcatgcctgctctggcg
attaccgatttcactaacttgtgcggactggttaaattttacggtgcagcacatggcgca
ggtgtaaaaccgattatcggtgcagacctgaatgtccaaagcgaaattctgggtgatgaa
ctggcccaactgactgttctggcgatgaataatcagggctaccagaacctgacattattg
atttccagagcatatcagcgcggttacggcgctgccgggccgatcgtcgatctcgaatgg
ctggcagaactcaatgaaggtttgatcctgctttccggcgcgagaatgggtgatgtcggt
aagtttctgacccgcggaaatgatttgcaagtcagtcagtgcctggatttctaccagcag
tatttccctgatcgctattatctcgaattgatccgtaccggtcgggcagaagaagaaaac
tatctgcatgcggcggtcgcactggcgacagaacgcggtttgccggtggtggcaaccaac
gacgtgcgctttatggtgccgaccgactttgatgcccatgagattcgtgttgcgatccac
gatggctttacactggatgatcctaaacgtccgcgcaattacacttcacagcaatatatg
cgcagtgaagatgaaatgtgcgagctgttcgaggatttgcctgaagctctgcaaaacagc
gtggaaatcgccaaacgctgtaatgtcaccatccgtctgggcgaatattttctgccgcag
tttcctaccggtgatatgaccactgaagattttctggtcgaaaaatcaaaaatcgggctg
gaagagcgccttgagtttttattcccggatccggaagttcgtgcacaaagacgccctgaa
tatgacgagcgtctggacatcgaacttaaagttatcaaccagatgggtttccccggttac
ttcctgatcgtaatggaattcatccagtggtcgaaagataacagcgtgcctgtcgggccg
gggcgtggttccggtgcgggttctctggtggcgtatgccctgaaaatcaccgatctggat
ccgctcgagtttgacctgctgttcgaacgtttccttaaccctgagcgtgtttccatgccc
gactttgacgtcgacttctgcatggaaaaacgcgaccgggttatcgatcacgtttcagaa
atgtatggccgcgaagcggtctcgcagatcatcaccttcggtaccatggcggccaaagcg
gtgatccgcgatgtgggccgtgttctggggcatccttacggtttcgttgaccgcatttcc
aaactggtgcctcctgatccggggatgacgcttgaaaaagcatttgccgctgagccgcag
ttgccagagatttacgaggctgacgaagaagttaagtcgctgatcgatatggcgcgtcag
ctggaaggtgtaacccgtaatgccggtaaacatgccggtggtgtggtgattgcgccgacc
aaaatcactgatttcgcgccgctttattgcgacgccgaaggtaatcacccggtcacgcag
ttcgataaaaatgacgtggaatacgcgggtctggtgaagttcgacttcctcggtctgcgt
acgctgaccatcatcgactgggcgctggagatgatcaacgcccgccgcgcgaaagccggt
gaggcaccgctggatattgcggccatcccgctggatgataaaaaaagcttcgacatgctg
caacgctcggaaaccacggcggtattccagcttgaatcccgcggcatgaaagatttgatt
aaacgtctgaagcccgacagctttgaagatatgatcgcattggtagcgctgttccgccct
gggccattgcagtccggcatggtggataactttattgaccgtaaacatggtcgtgaagag
atttcttatccggatatccagtggcagcatgaatccctgaaacctgtgctggagccgaca
tacggcatcatcctgtatcaggaacaggttatgcagattgcgcaggttctggccggttac
tcgctgggtggtgcagacatgctccgccgtgcaatgggtaagaaaaacccggtcgagatg
gccaagcagcgcggtggttttgaagacggggccaaatctcggggtattgacggcgaactg
gcgattaaaatctttgatctggtagagaaatttgccggttacggttttaacaaatctcac
tcggcggcttacgctttagtctcgtatcagacgctgtggctgaaagcgcactatcctgcg
gagttcatggcggcggtaatgacggctgatatggataacaccgagaaagtggtcgggctg
gtggatgaatgctggcgtatggggctgaagattttaccgcctgatatcaacagcggtctg
tatcatttccacgtgaatgatgaaggcgaaattgtttacggcatcggcgcgattaaaggc
gtgggtgaaggtccgattgaagccattattgaagcgcgtaacgaaggcggctatttcaaa
gaactgtttgatctctgcgcgcgtgctgacgtcaaaaaactgaacaaacgtattctcgag
aagctgatcatgtccggggcgtttgaccgtctgggaccacaccgtgccgcgttgatgagt
tccttaagcgacgcattgaaagccgctgatcaacatgccaaagccgaggcgattggtcag
gttgatatgtttggtgtgcttgcagaagcgcctgagcaggttgagaaatcttacgcgaat
gtgatgccatggccggaacaaacggttctggatggcgaacgtgagacgctcggcttgtat
ctgaccggccatccgatcacacaatatttgaaagaaattgaacgttatggcggtggccag
cgtttgaaagatatgcacccgacggaacggggcaaaatgaccgtcgcagtggggctggtc
cttgccgcgcgtgtcatggtcaccaagcggggtaaccgcattgggatctgtacacttgat
gaccgttccggtcgtctggaagtgatgttgttcaccgaagcgttggaaaaattccagcat
ttattggaaaaagaccgtatccttatcgccacaggacaggtcagctttgatgacttcagt
ggcgggcttaaaatgatggcccgcgatgtaatggacatcagtgaagcacgggaaaaatat
gctcgcggtcttgctatctcgctgactgacaggcaaattgatgaccagcttttgaaccgt
ctccgccaatcgttggaaccacatcgatcggggacgataccagtgcatctgtattaccaa
cgagaaaacgcaagagcccggctacgattcggggcgtcatggcgtgttacgccaacggac
aaactgttgctggatttgcgaggcctggtcggtactgagcaggtggaactggaatttgac
taa
DBGET
integrated database retrieval system
