Rahnella aceris ZF458: JHW33_21085
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Entry
JHW33_21085 CDS
T07163
Name
(GenBank) lysine decarboxylase LdcC
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
race
Rahnella aceris ZF458
Pathway
race00310
Lysine degradation
race01100
Metabolic pathways
race01110
Biosynthesis of secondary metabolites
race01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
race00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
JHW33_21085
Enzymes [BR:
race01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
JHW33_21085
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
QQN34849
LinkDB
All DBs
Position
4594302..4596449
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AA seq
715 aa
AA seq
DB search
MNIIAIMRPEGAYYKDEPIRELDSALTLLGFQVIYPRDRADLLKLIENNARICGAIFDWD
QHSEELCTAINELNEYLPLYAFINTHSTLDVDVNEMRMVLYFFEYALSAAEDIAKRIRQY
TDEYIDTITPPLTKALFTYVEEGKYTFCTPGHMAGTAFLKSPVGTLFYDFFGAKTLKADV
SISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYIVTNGTSTANKIVGMYAAPAGSTVLI
DRNCHKSLAHLMMMTNIVPVYLRPNRNAYGILGGIPKHEFTRESIEEKIAQTENATWPVH
AVITNSTYDGLLYNTDYIKNTLDVPSIHFDSAWVPYTNFHPIYDGKSGMSGERIPGKVIY
ETQSTHKLLAAFSQASMIHIKGDYNESTFNEAYMMHTTTSPNYGIVASAETAAAMLRGNP
GRRLINRSVERALHFRKEIQRLREETEGWFFDIWQPEYIDEAECWPLNPDQNWHGFANAD
TDHMYLDPIKVTILTPGMDETGKLEEQGIPAALVAKFLDERGVVVEKTGPYNLLFLFSIG
IDKTKSMSLMRGLTDFKRSYDLNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIVRH
DLPRLMLEAFDVLPEMKMTPYEMFQHQVRGHIDECDIDELVGKVSANMILPYPPGVPVVM
PGEMITEESRAVLDFLIMLCSIGERYPGFETDIHGTRLTEDGRYMVKVLKLPEAG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgaatattatcgctatcatgcgcccggaaggggcttactacaaagacgagccgatccgt
gaactggatagcgcgctgacgcttctcggatttcaggtcatttatccgcgcgatcgcgcg
gatctgctcaaactcatcgaaaataatgcccgaatttgcggcgctattttcgactgggat
cagcatagcgaagagctgtgtacagccattaatgagctgaatgaatatctgccgctttac
gctttcatcaatacgcattcgacgctggacgtcgacgttaatgaaatgcgcatggtgctc
tatttctttgaatacgcactgagtgcggcggaggatattgccaaacgcatccgccagtac
accgatgaatacatcgataccattacgccgccgctgactaaagcgttgttcacctacgta
gaagaaggaaagtacactttctgtacgccggggcatatggccggtacggcgtttttaaaa
agcccggtagggacgttgttctatgattttttcggggccaaaacgttgaaagccgatgtg
tcgatttctgtgacagaacttggttccctgttggatcacactggcccgcatcttgaggcg
gaggaatatatcgcccgtactttcggcgccgagcaaagttatatcgtcactaatggcacc
tcgacggccaataaaattgtcggaatgtatgcggcaccggcagggagtacggtgctgatt
gaccgcaactgtcataaatcgctcgcccatctgatgatgatgaccaatattgtgccggtc
tatttgcgtcccaatcgcaacgcgtatggtattcttggcgggattcctaagcatgaattc
acccgcgaaagcatcgaagagaaaattgcacagacagagaatgctacctggccagtgcac
gcagtgatcactaactcgacttacgacggcttgctgtacaacacggattacatcaaaaac
acactggatgttccgtcgattcatttcgattctgcatgggtgccatacactaatttccat
ccgatttatgacggtaaaagcggaatgagcggcgagcgcattcccggaaaagtcatttac
gaaacgcaatcaacgcacaaactactggcagctttctcacaggcatcgatgattcacatt
aagggtgattacaacgaaagtacctttaatgaagcctatatgatgcacaccacaacatcg
ccaaattacggcattgtggcttctgcagaaactgccgcagcgatgttgcgcggtaacccc
ggacggcgtctcattaaccgctcggttgaacgcgcgctgcatttccgtaaggagatacag
cggttgcgggaagaaaccgagggctggttctttgatatctggcagcctgaatatattgat
gaagccgagtgctggccgctgaaccccgatcaaaactggcacggttttgccaacgccgat
accgatcatatgtatcttgatccgatcaaagtgacgatcctgacacccggaatggatgaa
acgggtaagctggaagaacaggggatcccggcggcgttagtggcgaaattcctcgatgag
cgcggtgtggtggtagaaaaaaccggcccgtacaatctgcttttcctgttcagtatcggc
attgataaaaccaaatccatgagtctgatgcgcggcctgactgattttaagcgcagttat
gatctcaatttgcgggtcaagaatatgctgcctgatctgtatgcggaagatcctgatttt
tatcgcaatatgcggattcaggatctggcgcaggggatccacaaactgatcgttcgtcac
gacctgccgcgtttaatgctggaagcatttgatgtgctgcctgaaatgaaaatgacgccg
tacgaaatgttccagcatcaggtacgcggacatattgatgaatgcgacattgatgaactg
gtcggcaaagtgtcagccaacatgatcctgccttatccgccgggtgtacctgtggtgatg
ccgggcgagatgatcacggaagaaagtcgggctgtgctcgatttcctgattatgctttgt
tcgataggcgagcgttaccctggttttgaaactgatattcatggaacgcggctcacagaa
gacgggcgctatatggtgaaggtcttaaaacttccggaagcgggctag
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