Rahnella aceris ZF458: JHW33_24090
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Entry
JHW33_24090 CDS
T07163
Name
(GenBank) oligogalacturonate lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
race
Rahnella aceris ZF458
Pathway
race00040
Pentose and glucuronate interconversions
race01100
Metabolic pathways
race01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
race00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
JHW33_24090
Enzymes [BR:
race01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
JHW33_24090
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Paralog
GFIT
Motif
Pfam:
Pectate_lyase22
PD40
Tricorn_N
Tricorn_2nd
DPPIV_N
Motif
Other DBs
NCBI-ProteinID:
QQN37895
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All DBs
Position
pPlas2:complement(135285..136466)
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AA seq
393 aa
AA seq
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MAKGSQIQFNFHTVQDPQTGARVTRLTPPDVLCHRNYFYQKCFTRDGNKLLFAGEFDGNR
NYYLLDLKTQKAVQLTEGKGDNTFGGFLSPDDQYLYYVKNERSLQRVKLADFSEHTVYQV
PEEWVGYGTWVANSECTRLVGIEISREDWTPLSDWKIFQAFYHSNPHCRLLRVDLLSGKS
RVIHEKNEWLGHPIYRPFDDNTVAFCHEGPHDLVDARMWLVNEDGSNVRKVKEHAPGESC
THEFWVPDGSALMYVSYLKGQHDRHIRRFDPQTGEDVCLMTMPACSHLMSNENGTLLVGD
GSGTPVDVKDTASHTIENDPWLYIFDAKTRQHAPLAAHNSSWQVLDGDRQVTHPHPSFSP
DDRHVLFTTDYEGLPALYLAEIPDALLSSLRKD
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaggttctcagattcaatttaatttccataccgttcaggaccctcagaccggt
gcgcgggtaacccgtttaacgccgcccgatgtgttgtgtcatcgcaattatttctatcag
aaatgctttacccgtgatggcaataaactgttgtttgccggtgagtttgacggcaaccgc
aactattacctgctggatttgaaaacacagaaagcggtgcaactgacggaaggcaaaggc
gataatacttttggcggtttcctctctccggacgatcagtatctttactacgtcaaaaat
gaacgtagcctgcagcgcgtaaaactggctgattttagtgagcacaccgtgtatcaggtg
ccggaagaatgggttggctacggcacctgggtggccaacagcgaatgcacccgtctggtg
ggtatcgagatcagtcgtgaggactggacgcccctgtcagactggaaaatcttccaggcg
ttttatcacagcaatccgcactgccgtctgttgcgcgtcgatttactcagcgggaaatcc
cgtgtgatccacgagaaaaacgaatggctcggacacccgatttatcgcccgtttgatgac
aacaccgtcgctttctgccacgaaggccctcacgatctggttgatgcacgcatgtggctg
gtgaatgaagacggcagcaatgtgcgtaaagtgaaagagcatgcgccaggcgaaagctgc
acacatgaattctgggtaccggacggttctgcgctgatgtatgtgtcttatctgaaaggc
cagcatgaccgccacatccgccgtttcgatccgcaaactggtgaagatgtctgtctgatg
actatgccggcctgttcgcatctgatgagcaacgagaatggcacgctgctggtcggtgac
ggttccggtacgccggtagatgtgaaagacactgccagccatacgattgaaaacgatccg
tggttgtatattttcgatgccaaaacccgtcagcatgctcctctggccgcgcataacagt
tcatggcaagtgcttgatggcgaccggcaggtgacgcatccgcacccatctttctcgccc
gatgaccgtcacgtgcttttcaccaccgattacgaaggcttaccggcgctgtatctggcg
gaaatcccggatgccctcctcagttcattacgcaaggactaa
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