Rahnella aceris ZF458: JHW33_24140
Help
Entry
JHW33_24140 CDS
T07163
Name
(GenBank) virulence factor SrfB
Organism
race
Rahnella aceris ZF458
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SrfB
Motif
Other DBs
NCBI-ProteinID:
QQN37905
LinkDB
All DBs
Position
pPlas2:complement(148819..151791)
Genome browser
AA seq
990 aa
AA seq
DB search
MLATLTDFKQKITLIRDSGIQFLDFALKPVWDDGLPAKFVRKSANGPLLRLDYNPQNGRH
FLPGVDGGAPEVVRPEFSFPLEQSLKLLDQIWLPLPFLRFNPPRTFMAGPDNWARVQIRE
LDTPDADGSTHRVVIAFDTRVVEGDDEQTQLAPTPDDVKNGISFALAWHNEELPDFLDQT
WVDGWLREVFTEQSAIREEREARNIKVALREFEYQAHYLNLLEMLGSQLGIPELKINGAT
LQEPAINVDLILDVGNSHTCGILVEDHAGETDGLKQTCELQLRDLSQPHFLYNELFESRV
EFAQARFGKPNFSVESGRDDAFIWPSILRAGREASRLALLREGTEGSTGISSPRRYLWDE
DSYTPGWRFSQGGHGAITEPVAAAMPLTFLINDDGQPLSDLPAEDRLPVFSAHYSRSSVM
TLMLSELLAQALMQINSPAQRTRMLRSSAPRQLRNIILTLPSAMPKPEREIFRRRMQEAI
GLVWKSMGWHPSDDAFKNQNDKAKSSVPVPDVQMEWDEATCGQMVYLYNETQVNFGGHTG
EFFASMARPDRELADDEPVGKTLRIASIDIGGGTTDLAITQYWLDDGMGNNVKITPRLLF
REGFKVAGDDILLDVIQLYILPALHAALKKAGLANPDSLMTRLFGSEGRMDGHATLRQQS
TLQIFIPLARSVLEVYERFDPLDTHAEIDAPFGELLEQTPTLKVLDYLHTEIQRVLPAGS
AVFDLLQVPLVLKLSKLHSEFLSNRMSITQNLRSLCEVVSLHDCDVLLLTGRPSRFPGIQ
ALFRHLQPLPINRMLSLDGYHTSGWYPFNKLGRIDNPKSTAAVGAMLCLLALDLRLPGFY
FKAGDFQPYSTVRYLGMLDGNQVLTEDNVCYGDIDLDAHDYKLDSAASFRIRGAICLGFR
QLENDRWPASPLYTLSIAEPELARKVAGDSVLRVKLAVKKGEDHPTPEFFDIASAVLDNG
TKVPPHHLRLRLNTLGESHYWIDSGSVFVS
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgctggcaacccttacagattttaaacaaaagattaccctgatccgcgacagcggcatc
cagttcctcgacttcgcgctgaagccggtgtgggatgacggactgcctgccaaatttgtg
cgcaagagcgccaacggcccgttattgcgcctcgactataacccgcaaaatggtcgtcac
tttttaccgggagtggatggcggtgcgccggaagtggtgcgtcctgaattcagtttcccg
ctggaacagtcgctgaaactgctcgatcagatctggctgccgttgccgttcctgcgcttt
aatccgccgcgcacctttatggccggtcccgacaactgggcgcgggtgcaaatccgtgaa
ctggataccccggacgcggatggcagcacgcaccgtgtcgtgattgcctttgatacccgc
gtagtggaaggcgatgacgaacaaacccagctcgcaccgacaccggatgacgtcaaaaat
ggcatcagctttgcgctggcatggcataacgaagaactgcccgatttcctcgatcagacc
tgggttgacggctggttacgtgaagtattcaccgagcagtccgctatccgcgaggaacgt
gaagcgcgcaatattaaagtcgccctgcgtgaattcgaatatcaggcacattatctgaat
ctgctggaaatgctcggcagccagctcggtatccctgaactgaaaattaatggcgcgacg
ttgcaggaaccggcgattaacgtcgatctgattctggatgtgggtaactcgcacacctgc
ggcattctggtggaagaccatgcaggcgaaaccgatggcctgaagcaaacctgcgaactg
caactgcgcgacctctctcagccgcattttctctataacgaactgttcgagagccgggtg
gagttcgcccaggctcgctttggtaaaccgaatttctctgtcgaaagcggccgtgatgac
gcctttatctggccgtcaattttacgcgccggtcgggaagccagtcgtctggctctgttg
cgcgaaggaacggaaggatcgaccgggatttccagcccgcgccgttatttgtgggatgaa
gacagttatacgccgggctggcgtttcagccagggcggtcacggtgccattaccgaaccg
gtcgctgcagccatgccgctgacgtttctgatcaatgatgacggtcagccgctgtctgat
ctgcctgcggaagatcgcctgccggtgttctccgcccattacagccgcagctcggtgatg
acgctgatgctgtcggaattgctggcgcaggcgctgatgcaaatcaacagcccggcgcag
cgcacccgtatgctgcgatcttccgcaccgcgccagttacgcaatattattctgaccctg
ccctcggcgatgccgaaaccggagcgtgaaattttccgccgccgtatgcaggaagccatc
gggctggtgtggaaatccatgggctggcatccctctgacgacgcgtttaaaaaccagaac
gacaaagccaaaagcagcgtgccggtgccggatgtgcagatggaatgggacgaagcaacc
tgcggccaaatggtgtatctctacaacgaaacgcaggtgaattttggcggtcataccggc
gagttttttgccagcatggcgcgtcctgaccgcgaactggccgacgatgaaccggtgggc
aaaaccctccgtatcgcctcgattgacatcggcggcgggacgaccgatctggccatcacg
caatactggctcgatgacggaatggggaataatgtcaaaatcaccccgcgtttgctgttc
cgcgaaggctttaaagtggcaggcgacgatattctgctggatgtcattcagctctatatt
ttgcctgcgttacatgcggcgctgaagaaagccggactggctaacccggacagcctgatg
acgcgcctgtttggtagcgagggtcgcatggacgggcatgccaccttgcgtcagcaaagt
acgctgcaaatttttatcccgctggcgcggtcagtgctggaagtttacgaacgctttgat
ccgctggatacccacgcagaaatcgatgcgccattcggtgaattgctggaacagacacca
acgctgaaagtgctggattatctgcataccgaaatccagcgcgttctgcctgccggttcg
gcggtatttgatcttcttcaggtaccgctggtactgaaactcagcaagctgcacagtgag
tttttatccaaccgcatgagcattacgcagaacctgcgttcgctgtgtgaagtggtgtcg
ttgcatgactgcgatgtgttgctgctgaccggtcgcccttcgcgtttccccggcattcag
gcgttattccgccatctgcaaccgctgccgatcaaccgtatgctgtcactcgatggttat
cacaccagcggctggtatccgtttaacaaactcgggcgcatcgacaacccgaaatccaca
gcagccgtcggcgcaatgctgtgtctgctggcgctggatttacgtctgccgggcttctat
ttcaaagccggtgatttccagccgtattcgaccgtgcgctatctcggtatgctcgacggc
aatcaggtgctgactgaagataacgtttgttacggtgatatcgatcttgatgcccatgat
tacaaactcgatagtgcggccagtttccgcattcgcggtgccatttgtctgggcttccgc
cagctggaaaatgaccgctggccagcctcgccgctgtataccctgtccatcgcggaacct
gaactggcgcgtaaagtggcgggtgacagcgtgctgcgggtgaagctggcggtgaaaaaa
ggggaagatcatccgacgccggaattttttgatattgccagcgcggtgctggataacggc
accaaagtgcctcctcatcacctgcgcctgcggctaaatacactgggcgagagccattac
tggatcgacagtgggagcgtattcgtctcatga
DBGET
integrated database retrieval system
