Rahnella aceris ZF458: JHW33_24235
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Entry
JHW33_24235 CDS
T07163
Name
(GenBank) right-handed parallel beta-helix repeat-containing protein
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
race
Rahnella aceris ZF458
Pathway
race00040
Pentose and glucuronate interconversions
race01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
race00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
JHW33_24235
Enzymes [BR:
race01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
JHW33_24235
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta_helix
Pel9A-like_beta_helix
Motif
Other DBs
NCBI-ProteinID:
QQN37922
LinkDB
All DBs
Position
pPlas2:169172..171340
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AA seq
722 aa
AA seq
DB search
MWASKFVIVALSLGMSAQSLAAALPDTGKLVWHSITFGQSTDVNFATNVLPEKIGMNETL
LADGKAVPAAGTVLRTPFTLESRGGKVGNSHDGLTYFYTRLPAQVNFQLEAEITLNQFGP
ENGAKPAGQEGAGLLVRDILGNPREPVTIPGIEELPAASNMVMNSVMAIGDKPPVLAMIA
RQGVQQPWGNTGISMVRESYHPLSTPARFSLRLTRTDNGFTVAYAPQGSDQWVSKSVQRA
DSVTQLDKTGYYVGFFASRNAKMTVDHAKLTLSEAHTQPSAPYVTPSLNARIEVMSSPVI
TRRDSVFQLRTNGDGQVQVAQNGKPLLPQKAVRGGEMVAVAFHAEHPVTALKITYTPADG
KPVTQEFAVSMALVSNPDQLYVSPAGAAGNDGSAEHPLDFNSAVNLLAPGGTLWLKEGDY
PESVIPATASGTDKNRKTLRAQGDNVVFNGLTLNASYWNIQGITVTQKSFHIAGSYNHID
RVKAHHADDTGIWVASPDGIGRALWASHNLISNAESWGNQDPGRKNADGFAVKMRVGEGN
RLVNCYSHDNIDDGFDLFNKIEDGPNGSVTIEHSLSVNNGSNGFKLGGEGLPVSHVVRHN
VAVGNGMDGFTDNFNPGALVIEDNRAVDNKRFNFLFRPSPYTTADKQGTFKDNISLRTTA
GKYDDAVTGNVDHSNYFYADHKTVNTKHQEIKPGDYISLRLPDPITRLSDGGFNYADFLK
NK
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcatcaaaatttgtcattgtcgcgctgtccctcggaatgagcgcacaaagcctg
gccgctgcattgccggataccggcaaactggtctggcacagcatcacatttggtcagtca
accgacgtcaatttcgccaccaacgttctgccggagaaaatcggcatgaacgaaacctta
ctggcagatggcaaagcagttccggcggcgggcaccgtgctccgcacgccgttcacactc
gaaagccgtggcggcaaagtcggtaacagtcacgacggcttaacttatttctatacacgc
ttaccggcgcaggtgaatttccagcttgaagcggagatcacactcaaccagttcgggccg
gaaaatggtgcgaaacccgccgggcaggaaggggccggattactggtacgcgatattctg
ggcaatccgcgtgagccggtgaccataccggggattgaggagttaccggcagcatcaaat
atggtgatgaacagtgtcatggccatcggcgataaaccgccggtgctggcgatgattgcc
cgtcagggcgtacagcaaccctggggaaataccggcatcagcatggtacgtgaaagctat
catccgctgagtacgccagcccgtttttcgctgcgactgacccgcacggacaacggtttt
accgtcgcctatgcgccacaaggcagtgatcagtgggtaagcaaatccgtgcagcgcgcg
gacagcgtgacacaactggataaaaccgggtattacgtcggtttcttcgcctcacgcaat
gccaaaatgacggtagatcacgcaaagctgacactcagcgaagcgcatactcagccctct
gcgccgtatgtgacaccgtcacttaatgcgcgtattgaggtgatgtcatcgccggtcatt
acccgccgcgacagcgtgttccagttacgtactaacggtgacggacaggtgcaggttgct
cagaatggcaaaccgctgttgccgcaaaaagcggtacgcggtggtgaaatggtcgccgtt
gcgtttcatgctgaacacccggtgacagcgctgaaaataacctacaccccggcagacggc
aaaccggtgacgcaggaatttgcggtgagtatggcgctggtcagcaatcctgaccagttg
tatgtttcaccggctggcgcggcaggtaatgacggctcggctgaacatccgctggatttt
aacagtgccgttaatcttttagcaccgggcggcacgctgtggctgaaagagggggattat
ccggaaagcgtgatcccggcaaccgccagcggcaccgacaaaaaccggaaaaccctgcgt
gcacagggcgacaacgtagtgtttaacggcctgacactcaatgccagctactggaatatt
cagggcattaccgttacgcaaaaaagctttcatattgccggaagctataaccatatcgac
cgcgtgaaggcgcatcacgccgacgataccggcatctgggtggcatcgccggacggcatc
gggcgggcattatgggccagccataatctcatcagcaatgctgagtcctggggaaatcag
gatccggggcgcaagaacgccgacggatttgccgtcaaaatgcgcgtgggcgagggtaac
cggctggtgaactgttattcccacgacaatattgacgatggtttcgacctgttcaacaaa
atcgaagacggcccgaacggcagtgtgaccattgagcacagcctgtcagtgaacaacggc
agcaatggtttcaaactgggtggcgaaggattaccggtcagccatgtggtgcgtcacaac
gtcgcggtaggcaacggcatggacggctttaccgacaacttcaatccgggcgcgctggtt
atcgaagacaaccgcgcagtcgataacaaacgcttcaacttcctgttccggccttcgcca
tacaccacggctgacaagcagggcacttttaaggacaacatttcgctgcgcaccaccgca
ggaaagtatgacgatgccgtgaccggtaatgtggatcacagtaattatttttacgctgac
cacaaaacggtgaatacaaagcatcaggaaattaaaccgggagattatatttctctgcgg
ttgccggatccgattacccgtctttcagacggcggatttaattatgctgactttttgaaa
aacaaataa
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