Rahnella aceris ZF458: JHW33_25220
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Entry
JHW33_25220 CDS
T07163
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
race
Rahnella aceris ZF458
Pathway
race02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
race00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JHW33_25220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
race02000
]
JHW33_25220
Transporters [BR:
race02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
JHW33_25220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
IDEAL
Motif
Other DBs
NCBI-ProteinID:
QQN38026
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All DBs
Position
pPlas2:complement(394215..395810)
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AA seq
531 aa
AA seq
DB search
MTAGWTAQAKTPPDQLIIGMNMNNLLTLDPAAMTGNDIVGIVVNLYDPLIELDPQQLTNV
RPALATSWEVNDARNLITFHLREGVKFHSGNPVTADDVVWSMRRILHLNLAQASVWKSYG
FSKKNVDEMVRSPSPGIVEIQLPKPNDPKLVIYSLAALGSVVALDSKTVQTHEVNGDWGN
RWLTTNEAGSGPFRLDSWQAKDVLNMSRNPQYWRGEPKLSRVVFRHFQESQTLRLMIEKG
DLDIANNMAVSDVKALSHDPAMQVDQVKKGTIYYVAMSMKEPHFANPKVREAVRYLIDYQ
GIGKALMDGYGIVHQRPIQVGMPATLPDPGYKLDIPRARTLLAEAGYPDGFDTTLRVLAD
QPFLNIAIAVQSTLMQAGIRAKIVTGTGNQIYGAMRERKFDMLVGRGGSGVEPHPHSSLR
ALVYNPDNNDAARLTNFQGWRTGFYDKQLNADIDQALLERDPEKQKQDYFAIQQRYDALI
PALVPLSQMVDSIVVRRDVKNYLPHPSATTFLRDVWKDEPADVQPTGGKGL
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgacggctggctggacggcgcaggcaaaaacgccgcccgaccagctgatcatcggcatg
aacatgaataacctgttaacactcgatccggcagcgatgaccggcaatgatattgtcggc
atcgtggtcaacctttatgacccgctgattgagcttgatccgcaacaactcaccaacgtg
cgcccggcgctggcgacctcgtgggaggtcaacgacgcccgcaacctcatcacgtttcat
ctgcgcgaaggcgtgaaattccactccggcaatccggtgactgctgacgatgtggtgtgg
tcgatgcgccgcattctgcatctcaatctggcacaggcctcggtgtggaaatcctacgga
ttcagcaaaaagaatgtcgatgagatggtgcgttcgccgtctcccggtatcgtcgaaatt
cagttacccaaacccaatgacccgaaactggtgatctactcgctggccgcgctcggcagc
gtggtggcgctggacagcaaaaccgtgcagacccatgaagtgaatggcgactggggtaac
cgctggctgaccaccaacgaagccggttccgggccatttcgtctcgacagctggcaggcg
aaagatgtgctgaacatgagtcgcaatccgcagtactggcgcggtgaaccgaaactgtcg
cgcgtggtattccgtcattttcaggaatcccagacgctgcgcctgatgattgaaaaaggc
gatctggatattgccaataacatggcggtgtctgatgtgaaagcgctgagccacgacccg
gccatgcaggtcgatcaggtgaaaaaaggcaccatttattacgtggcgatgagcatgaaa
gagccgcatttcgctaacccgaaagtacgcgaagcggtgcgctatctgattgattaccag
ggtatcggcaaggcgctgatggacggttatggcatcgtgcatcagcgtcctattcaggtc
ggtatgcctgccacgttgccggatccgggttataagctggatatcccgcgtgccagaact
ttgctggcggaagccggttatcccgacggttttgatactacgctgcgggtgctggccgat
cagccgttcctcaatattgcgattgcggtgcagtccacgctgatgcaggcagggatccgc
gccaaaatcgttaccgggaccggcaaccagatttacggcgcgatgcgtgaacgcaagttc
gacatgctggtcgggcgcggcggcagcggcgtggaaccgcatccgcattccagcctgcgc
gcgctggtctacaacccggataacaacgatgcggcacggctgaccaattttcagggctgg
cgcaccggtttctatgacaaacagctgaatgcggatatcgatcaggcgctgcttgaacgt
gaccccgagaaacagaaacaggattacttcgccattcagcaacgttacgacgcgctgatc
ccggcgctggtgccgctctcgcaaatggttgattccattgtggtgcgcagggacgtcaaa
aactacctgccgcatccttctgccaccacgttcctgcgtgacgtctggaaagatgaacct
gctgacgtgcagccaaccggaggtaaagggttatga
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