Rhizobium acidisoli: CO657_01200
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Entry
CO657_01200 CDS
T06438
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rad
Rhizobium acidisoli
Pathway
rad03420
Nucleotide excision repair
rad03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CO657_01200
03430 Mismatch repair
CO657_01200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rad03400
]
CO657_01200
Enzymes [BR:
rad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CO657_01200
DNA repair and recombination proteins [BR:
rad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CO657_01200
MMR (mismatch excision repair)
Other MMR factors
CO657_01200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
RecR_HhH
HHH
AAA_12
Motif
Other DBs
NCBI-ProteinID:
QAS76799
UniProt:
A0AAE5TSY0
LinkDB
All DBs
Position
complement(239480..241540)
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AA seq
686 aa
AA seq
DB search
MYLEKLNPQQRMAVEHGTLTDGSHIAGPLLVIAGAGSGKTNTLAHRVAHLIVKGADPRRI
LLMTFSRRAAAEMARRVERICRDVLGANAGVMADALNWSGTFHGIGARLLRDYAQQIGLD
ADFTIHDREDSADLINLIRHDLGFSKTESRFPAKGTCLAIYSRAVNSETALDQVLRDAFP
WCATWEKQLRELFACYVEAKQSQNVLDYDDLLLYWAQMVGESVIAEDIGSRFDHVLVDEY
QDTNRLQASILMALKPGGQGLTVVGDDAQSIYSFRAATVRNILDFPAAFSPAANIVTLDR
NYRSTQPILAAANAVIDLASERFTKNLWTERQSAERPRLVTVRDEADQARYVADMVLDNR
EEGLTLKQQAVLFRASHHSGPLEVELTRRNIPFVKFGGLKFLDSAHVKDMLAALRFAQNP
RDRVAGFRLMQILPGVGPSTAQKALDLMAEDASPITALAAMPAPPRSGEDWTGFVAMLQE
MKSGKAGWPAEIELARQWYAPHLERLHEDAATRQADLLQLEQIASGYASRERFLTELTLD
PPDATSDQAGVPLLDEDYLILSTIHSAKGQEWTRVFMLNVVDGCIPSDLAVGASAEIEEE
RRLLYVAMTRARDGLDLVVPQRFFTYGQNAQGDRHVYASRSRFIPATLLQFFEACSWPQV
KSEAAAQAQARQVRIDVGARMRGMWR
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgtatctcgaaaagctcaatccccagcagcgcatggccgtcgagcatggcacgctcacc
gacggcagccatattgccgggccgctgctggtcattgccggcgccggttcgggcaagacc
aatacgctggcgcatcgggttgcccatctgatcgtcaagggcgccgatccgcgccgcatc
ctgctgatgaccttctcgcgccgggccgccgccgagatggcgcggcgcgtcgagcgcatc
tgccgcgatgtgctgggtgcgaatgccggtgtgatggccgatgcgctgaactggtccggc
accttccacggcatcggcgcgcggctgttgcgcgattatgcgcagcagatcggcctcgat
gccgatttcaccattcacgaccgcgaagacagcgccgacctgatcaacctcatccggcac
gatctcggcttctccaaaacggaaagccggttcccggccaagggcacctgccttgcgatc
tattcccgagcggtgaattccgagacggcgctcgaccaggtgctgcgcgacgcttttccc
tggtgtgcgacctgggaaaaacagctgcgcgagctgttcgcctgttatgtcgaggcgaag
cagagccagaacgtgctcgattacgacgacctgctgctctactgggcgcagatggtcggc
gaaagcgtgattgccgaggatatcggcagccgcttcgaccatgtgctggtcgacgaatat
caggacaccaaccggctgcaggcctcgatcctgatggcgctgaagcccggcggccagggg
ctgacggtcgtcggcgacgatgcgcagtcgatctattccttccgtgcggcgacggtgcgc
aatattctcgattttcccgccgccttcagcccggccgccaatatcgtcacgctcgaccgc
aactaccgctcgacgcagccgatcctggcggcggccaatgccgtcatcgatctcgcctcg
gagcgcttcaccaagaacctgtggaccgagcggcaatctgccgagcggccgcgcctggtc
accgtgcgcgacgaggccgaccaggcgcgttatgtcgccgacatggtgctcgacaatcgc
gaggaaggcctgacgctcaagcagcaggcggtgctgttccgcgcctcgcatcacagtgga
ccgctggaggtcgagctgacccggcgcaacattcctttcgtcaagttcggcgggctgaaa
tttctcgacagcgcccatgtcaaggacatgctggcggcgctgcgcttcgcacagaacccg
cgcgaccgggtggcaggcttccggctgatgcagatcctgccgggcgtcgggccgtcgacg
gcgcagaaggcgctcgacctgatggccgaggatgcgagcccgatcacggcgctggccgcc
atgccggcgccgccgcgctccggcgaggactggactggtttcgttgccatgctgcaggag
atgaaatccggcaaggccggctggccggcggaaatcgagctggcgcggcaatggtatgcg
ccgcatctggagcggctgcatgaggacgcggcgacgcggcaggccgatctgctgcagctc
gagcagattgccagtggttatgcctcgcgcgagcgtttcctcaccgaactcaccctcgat
ccgccggatgcgaccagcgaccaggccggcgtgccgctgcttgacgaggattacctcatt
ctttccacaatccattccgccaagggccaggaatggacaagggtcttcatgctgaacgtc
gtcgacggctgcattccgagcgatcttgccgtcggcgccagcgccgaaatcgaggaggaa
cgccggctgctctatgtggcgatgacccgcgcccgcgacggtctcgaccttgtggtgccg
cagcgcttcttcacctatgggcagaatgcgcagggcgaccggcacgtctatgcctcgcgc
agccgcttcattccggcgacgctgctgcagttcttcgaagcctgtagctggccgcaggtg
aagtccgaggcggcggcgcaagcgcaggcgcggcaggtgcgcatcgatgtcggcgcccgc
atgcgcggcatgtggcgataa
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