Rhizobium acidisoli: CO657_05935
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Entry
CO657_05935 CDS
T06438
Name
(GenBank) amidase
KO
K21470
L,D-transpeptidase YcbB
Organism
rad
Rhizobium acidisoli
Brite
KEGG Orthology (KO) [BR:
rad00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rad01002
]
CO657_05935
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rad01011
]
CO657_05935
Peptidases and inhibitors [BR:
rad01002
]
Cysteine peptidases
Family C82
CO657_05935
Peptidoglycan biosynthesis and degradation proteins [BR:
rad01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
CO657_05935
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QAS77647
UniProt:
A0AAE5TU82
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Position
1182275..1183576
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AA seq
433 aa
AA seq
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MSKKNGNEALSRRAFLASAATVGVSAIAAPAFAQSAIDTLINAPRRGNWDDQFDAKAASR
TASAVVSNTPILGPQSLASAQQAVMQYQQIAAAGGWPEVNPGDQKLQLGVSHPAVQALRQ
RLAITGDLPREAGMSSAFDSYVDGAVKRFQARHGLPSDGVLGEFTLKAMNIPADVRLQQL
NTNIIRLQTFPEDLGRRHVMVNIPAAYVEAVEDGTVATRHTAVVGRLSRPTHLVNSKIYE
VILNPYWTSPRSIVEKDIMPLMRKDPTYLEKNAIRLIDGKGNEVAPETIDWNGEAPNLMF
RQDPGKTNAMASTKINFYNKNGEYMHDTPQQGLFNKLMRFESSGCVRVQNVRDLSNWLLR
ETPGWNRQQMEQVIASGVNTPVKLATEVPVYFVYISAWGMPDGIVQFRDDIYQMDGNAEL
ALDTTAGMEQPVQ
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagaaaaacggaaatgaagctctctcgcgccgcgctttccttgcgtccgcggca
acggttggcgtaagcgcgattgccgcgccggccttcgcgcaatcggcgatcgatacgctg
atcaatgcgccgcgccgcggcaactgggacgaccagttcgatgccaaggcggcttcgcgc
acggcaagcgccgtcgtttccaacacgccgatccttggtccccaatcgctcgccagcgcc
cagcaggcggtcatgcagtatcagcagatcgcggccgccggcggctggccggaggtcaat
cccggtgaccagaagctgcagctcggcgtcagccatcccgcagttcaggcgctgcgccag
cgcctggcgatcaccggcgacctgccgcgcgaggccggcatgtcgagtgccttcgactcc
tatgtcgacggcgccgtcaagcgcttccaggcccgccacggcctgccgtccgatggtgtg
ctcggcgaattcacgctgaaggcgatgaacatccccgccgatgtccgcctgcagcagctg
aacaccaatatcattcgcctgcagacgttccccgaggatctcggccgccgccacgtgatg
gtcaacatcccggctgcctatgtcgaagctgtcgaggatggcactgtcgcgacgcgccac
accgcggttgtcggccgtctcagccgtccgacacatctcgtcaattcgaagatctacgag
gtcatcctcaacccctactggacctcgccgcgctcgatcgtcgagaaggacatcatgccg
ctgatgcgcaaggatccgacctatctcgaaaagaatgccatccgcctgatcgacggcaag
ggcaacgaagtcgcccccgagaccatcgactggaacggcgaggcgcccaacctgatgttc
cgccaggaccccggcaagaccaacgctatggcctcgacgaagatcaacttctacaacaag
aacggcgagtacatgcacgacacgccgcagcagggcctgttcaataagctgatgcgcttc
gagtcgtctggctgcgtccgcgtccagaacgtgcgcgacttgtcgaactggctcttgcgc
gagacccccggctggaaccgccagcagatggagcaggtgatcgcatccggcgtcaacacg
ccggtcaaactcgccacggaagttccggtctatttcgtctacatttccgcctggggcatg
cccgacggcatcgtccagttccgcgacgacatctatcagatggacggcaatgccgagctg
gcgctcgataccacggccggcatggaacagccggtccaataa
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