Rhizobium acidisoli: CO657_13815
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Entry
CO657_13815 CDS
T06438
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rad
Rhizobium acidisoli
Pathway
rad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CO657_13815 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rad03019
]
CO657_13815 (recQ)
03400 DNA repair and recombination proteins [BR:
rad03400
]
CO657_13815 (recQ)
Enzymes [BR:
rad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CO657_13815 (recQ)
Messenger RNA biogenesis [BR:
rad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CO657_13815 (recQ)
DNA repair and recombination proteins [BR:
rad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CO657_13815 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
HHH
ResIII
GARS_N
HTH_35
DprA_WH
Motif
Other DBs
NCBI-ProteinID:
QAS79078
UniProt:
A0AAE5TW68
LinkDB
All DBs
Position
complement(2782629..2784494)
Genome browser
AA seq
621 aa
AA seq
DB search
MPQTERNEPGFSASDALFSAGRAPLDILKQVYGYSSFRGKQQLVVEHVVAGGDAVVLFPT
GAGKSLCFQIPALCRDGVGIVVSPLIALMRDQVEAMKQLGIRAAALNSSLSREEFVEVRR
ALSAGKLDLLYVTPERILTDGFRELIANEKIALFAIDEAHCVSQWGHDFRPEYRALGQLG
EQYPGVPRVALTATADPHTRDDIIERLGLDAAEIFTTSFDRPNIAYEIVERDQPRQQLLR
FLSGHKGNSGIVYCLSRAKVEDTAEWLNGQGVRALAYHAGMDRAVRDANQDAFLKEENLC
LVATVAFGMGIDKPNVRYVAHLDLPGSVEAYYQETGRAGRDGLPSEVWMAYGMADVIQRG
RMIDEGSAAAEIKRVERAKLNALLAICETASCRRQAILAHFGEAHAGQCGNCDTCLKPVE
TWEGTEAAIKALAAIYRTGERFGAGHVIDVLVGNVNEKTERFGHVDMPVFGAGKDIPSRT
WQSVYRQLLAMGLIRVDHEAYGALKLEPEARAVFKQERQVFFRKDRPASERRAKKAERSE
RKSGLSGADGTLFDALRAERMAIAKSLGVPPYVVFPDTTLIAFATERPRSRKELLAISGV
GQAKLERYGDAFLEIILAQDG
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagaccgaacggaacgaaccgggcttttccgcctccgatgcgctgttttccgcc
ggccgtgcgccgctcgatattctcaagcaggtctatggctattcctccttccgcggcaag
cagcagctggtggtcgaacatgtagtcgccggcggcgatgctgtggtgctcttccccaca
ggcgcgggcaaatcgctgtgcttccagatcccggcgctctgccgtgacggcgtcggcatt
gtcgtttcgccgctgattgcgctgatgcgcgatcaggtcgaggcgatgaagcagctaggc
atccgcgccgccgcgctcaattcgtcgctgtcgcgcgaagagttcgtcgaagtccgccgc
gcgctttcggcaggaaagctcgaccttctctacgttacacccgagcgcattctgaccgat
ggcttccgcgagctgattgccaacgagaagatcgcgctgtttgccatcgacgaggcgcat
tgcgtttcgcaatggggtcatgatttccggccggaatatcgcgcgctcggccagcttggc
gaacaatatcccggcgtgccgagggtggcgttgacggcgacggccgatccgcatacacgc
gacgacatcatcgagcggctggggctcgacgctgccgagatcttcaccaccagcttcgac
cggccgaacatcgcttacgaaatcgtcgagcgcgaccagccgcgccagcagctgttgcgc
ttcctgtccggccacaagggaaacagcggcatcgtctattgcctgtcgcgcgcaaaggtc
gaggatacggcggagtggctgaatgggcagggcgtgcgcgcgcttgcctatcatgccggc
atggaccgggcggttcgcgacgccaatcaagatgccttcctgaaagaggaaaacctctgc
ctggtcgccaccgtcgccttcggcatgggcatcgacaagccgaatgtgcggtatgtcgcc
catctcgacctgccgggctcggtcgaggcctattatcaggagaccgggcgcgccggccgt
gacggcctgccgtcggaggtctggatggcctatggcatggccgacgtcatccagcgcggc
cggatgatcgacgagggcagtgctgctgcggagatcaagcgggtcgagcgcgccaagctc
aatgcattgctggcgatttgcgagaccgcctcctgccgccgccaggcgatccttgcacat
ttcggcgaggcgcatgccggacaatgcggcaattgcgacacctgcctgaagccggtcgag
acctgggagggcacggaagcggcgatcaaggcgctggccgcgatctaccgtaccggcgaa
cgtttcggcgccggccacgtcatcgatgtgcttgtcggcaacgtcaacgaaaagaccgag
cgtttcggccatgtcgatatgcctgtttttggcgccggcaaggatattccatcgcgcacc
tggcaatccgtctaccgccagctgctcgccatggggttgatccgtgtcgatcacgaagcc
tatggcgcgctgaagctggagccggaggcgcgcgccgtcttcaagcaagagcggcaggtg
ttcttccgcaaggaccgcccggcctcggaacggcgcgccaagaaggctgaacgcagcgag
cgcaaatcgggattgtcaggcgccgacggcaccctcttcgacgcgctgcgggccgagcgc
atggcgatcgccaaatcgctcggcgtgccgccctatgtggtctttcccgatacgacgctg
atcgcctttgcgacggaacggccgaggagccgcaaggaactgcttgccatatcgggcgtc
ggccaggcgaagctcgagcgttacggcgatgcgttcctggaaatcatcctggcgcaggac
ggctga
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