Rhizobium acidisoli: CO657_16575
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Entry
CO657_16575 CDS
T06438
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
rad
Rhizobium acidisoli
Pathway
rad03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CO657_16575 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rad03400
]
CO657_16575 (ruvB)
Enzymes [BR:
rad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CO657_16575 (ruvB)
DNA repair and recombination proteins [BR:
rad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CO657_16575 (ruvB)
RecFOR pathway proteins
CO657_16575 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_14
AAA_3
Rad17
AAA_22
AAA_16
AAA_2
nSTAND3
ResIII
AAA_17
AAA_18
RNA_helicase
AAA_28
DUF815
AAA_33
TsaE
NTPase_1
AAA_24
IstB_IS21
NB-ARC
ABC_tran
Bac_DnaA
Sigma54_activ_2
AAA_7
Cytidylate_kin
NACHT
Motif
Other DBs
NCBI-ProteinID:
QAS79575
UniProt:
A0AAE5TZI5
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All DBs
Position
3372082..3373122
Genome browser
AA seq
346 aa
AA seq
DB search
MSEPARLISPEKRGEDLDITLRPQSLDEFTGQAEARANLKVFIEAAKNRGEALDHVLFVG
PPGLGKTTLAQIMAKELGVNFRSTSGPVIAKAGDLAALLTNLEERDVLFIDEIHRLNPAV
EEILYPAMEDFQLDLIIGEGPAARSVKIDLSKFTLVAATTRLGLLTTPLRDRFGIPVRLS
FYTVEELELIVRRGARLMNLPITEEGAREIARRARGTPRIAGRLLRRVRDFAEVARAEAV
TREIADEALTRLLVDNVGFDQLDKRYLNMIAVNFGGGPVGIETIAAGLSEPRDAIEDIIE
PYMIQQGFIQRTPRGRVLTAIAWKHLGMQPPKEMEAAQFRLFQEDN
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacccgcccgcctgatatcgccggaaaagcggggcgaagatctcgacatcacc
ctgcgcccgcaatcgctggacgaattcaccggccaggccgaagcgcgcgccaatctcaag
gtcttcatcgaggcagcgaagaaccgcggcgaggcgctggaccatgtgctattcgtcggc
ccgcccggcctcggcaagacgacgttggcgcagatcatggcgaaggaactcggcgtcaat
ttccgctcgacgtcaggtcccgtgattgccaaggccggcgatctcgccgcgctgctgacc
aatctcgaagagcgcgacgtgctcttcatcgacgagatccatcgcctcaacccggctgtc
gaggaaattctctatccggccatggaagatttccagctcgacctgatcatcggagaaggc
cccgccgcccgctcggtgaaaatcgatctgtcgaaattcaccctggtggcggcgaccacc
cgcctcggcctgctgacgacgccgctgcgcgaccgtttcggcatcccggtgcgcctgagc
ttctataccgtcgaggagctggaattgatcgtgcgccgcggcgcgcggctgatgaacctg
ccgataaccgaagagggcgcccgcgaaatagcaagacgcgcccgcggcacgccgcgcatc
gccggccggctgctacggcgcgtgcgcgacttcgccgaggtggcaagggcagaggcggtg
acgcgtgagatcgcagacgaggcgctgacccgcttgctggtcgacaatgtcggcttcgac
cagctcgacaaacgttacctcaacatgatcgccgtcaatttcggcggcggcccggtcggc
atcgaaaccatcgccgccggcctttccgagccgcgtgacgcgatcgaggacatcatcgag
ccctatatgatccaacagggtttcattcagcgcacgccgcgcggccgtgttctgaccgca
atcgcgtggaaacatctcggaatgcaaccgcccaaggaaatggaggctgcgcagttccgg
ctgttccaggaggacaactga
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