Rhizobium acidisoli: CO657_20290
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Entry
CO657_20290 CDS
T06438
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
rad
Rhizobium acidisoli
Brite
KEGG Orthology (KO) [BR:
rad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rad03032
]
CO657_20290 (gyrB)
03400 DNA repair and recombination proteins [BR:
rad03400
]
CO657_20290 (gyrB)
Enzymes [BR:
rad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CO657_20290 (gyrB)
DNA replication proteins [BR:
rad03032
]
Prokaryotic type
DNA Topoisomerases
CO657_20290 (gyrB)
DNA repair and recombination proteins [BR:
rad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CO657_20290 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
GyrB_insert
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QAS80270
UniProt:
A0AAE5WNZ0
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Position
4165956..4168391
Genome browser
AA seq
811 aa
AA seq
DB search
MSDTSATENGVSTEYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAIDE
ALAGHADIVTVTLNPDGSVTVTDNGRGIPTDIHTGEGVSAAEVIMTQLHAGGKFDQNSYK
VSGGLHGVGVSVVNALSVWLKLKIRRHDKIHEMSFTHGVADAPLKVTGEAPNETGTEVSF
MPSTDTFTMTEFDYGTLEHRLRELAFLNSGVRILLTDKRHSDIKQEELRYDGGLEAFVAY
LDRAKKSLVDKPVAIRGEKDGITVEVAMWWNDSYHENVLCFTNNIPQRDGGTHMAGFRAA
LTRQVVSYADSSGITKREKVTLQGEDCREGLTAVLSVKVPDPKFSSQTKDKLVSSEVRPV
VESLVNEALNTWFEEHPSEAKILVGKVVEAAAAREAARKARELTRRKGALDIASLPGKLA
DCSERDPTKSEVFLVEGDSAGGSAKQGRSRENQAILPLRGKILNVERARFDKMLSSQEIG
TLITALGTGIGKDEFNVEKLRYHKIIIMTDADVDGAHIRTLLLTFFFRQMPELIERGHLY
IAQPPLYKVSRGKSVQYLKDEKALEEYLISQGLEDAALKLGSGEVRTGQDLREVILDALR
MRALLDNLHSRYNRAAIEQAAIAGALNAERVSDRARAQALTSEVASRLDIIAEETERGWQ
GDLTSDGGLRLERMVRGVKEIVVLDMALIGSSDARHIDQLTSRLKEIYQTPPSLHRREGD
LEISGPRALLDAIFATGRKGLTMQRYKGLGEMNAEQLWETTLDPNVRSLLQVKVPDATDA
DGLFARLMGDEVEPRREFIQDNALSVANLDI
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatacatccgcgacggaaaacggcgtaagcaccgaatatggcgcagattccatc
aaggttctgaagggccttgatgccgtgcgcaagcgtcccggcatgtatatcggcgatacc
gacgatggctccggccttcatcacatggtctatgaagtcgtcgacaacgcgatcgacgaa
gcgcttgccggccatgccgacatcgtcaccgtcacgctcaatccggatggctcggtgacc
gtcaccgacaacggccgcggcatcccgacggacattcataccggcgaaggtgtgtcggcg
gctgaagtcatcatgacgcagctgcatgccggcggcaagttcgaccagaattcctataag
gtctccggcggcctgcacggcgtcggcgtctccgtcgtcaacgcattgtccgtctggctg
aagctgaagatccgccgccacgacaagatccatgaaatgagcttcacccatggcgtggcc
gatgcgccgctcaaggtcaccggcgaagcgccgaatgagaccggcacggaagtgagcttc
atgccgagcaccgacacgttcaccatgacggagttcgactacggcacgctcgagcatcgc
ctgcgcgaacttgccttcctgaactcgggcgtgcgcatcctgctgaccgacaagcgccat
tccgatatcaagcaggaagagctgcgttatgacggcggcctcgaggctttcgtcgcctat
ctcgaccgggccaagaagtcgctcgtcgacaagccggtcgccatccgcggcgaaaaggac
ggcattaccgtcgaagtggcgatgtggtggaacgacagctaccacgagaacgtgctctgc
ttcaccaacaacattccccagcgcgacggcggcacgcatatggccggtttccgcgctgcc
ttgacacgacaggtcgtatcctacgccgacagttccggcatcaccaaaagggaaaaggtg
acgctgcagggcgaggattgccgcgaaggcctgacggcggtgctctcggtcaaggtgccc
gatccgaaattctcctcgcagaccaaggataagcttgtctcctcggaagtccgtccggtt
gtcgaaagtctcgtcaacgaggcgctgaacacctggttcgaagagcatccgagcgaagcc
aagattctcgtcggcaaagtcgtcgaggcagcggccgcgcgcgaagcggcccgcaaagcc
cgcgaattgacccgccgcaagggcgccctcgatatcgcctcgctgcccggcaagctcgcc
gactgctcagagcgtgatccgacaaaatcggaagtcttcctcgtcgagggcgattccgcc
ggcggctcggccaagcagggccgctcgcgcgaaaaccaggcgatcctgccgttgcgcggc
aagatcctcaatgtcgagcgtgcccgtttcgacaagatgctgtcgagtcaggaaatcggc
acgctgatcacagcactcggcaccggcattggcaaggacgagttcaacgtcgaaaagctg
cgctatcacaagatcatcatcatgacggatgctgatgtcgacggcgcccatatccgcaca
ttgctgctgacctttttcttccgccagatgccggaactgatcgagcgcggccatctctat
atcgcccagccgccactctataaggtctcgcgcggcaagtcggtgcagtatctgaaggac
gaaaaggcgctggaggaatacctcatcagccagggcctggaagatgcggcgctgaagctc
ggcagcggcgaagtccgcaccggccaggatctgcgtgaggttatcctcgacgcgttgcgc
atgcgcgctttgctcgacaatctccattcgcgttacaatcgtgcggccatcgaacaggcg
gcgatcgccggcgctctcaatgccgaacgcgtcagcgaccgggcaagagcccaggcattg
acgagcgaggtggcaagtcgcctcgacatcatcgccgaggaaaccgaacgtggctggcag
ggcgatctgaccagcgatggcggtctgcgtctcgaacgcatggtccgcggcgtcaaggaa
atcgtcgtgctcgacatggcgctgatcggctcctccgatgcccggcacatcgaccagctg
acgtcacggctcaaggaaatctatcagacgccgccgtcgctgcatcgccgcgaaggcgac
ctcgagatttcgggcccgcgcgccttgctcgacgccatcttcgcgaccggccgcaagggc
ctcaccatgcagcgttataagggtcttggcgagatgaatgccgaacagctctgggaaacg
acgctcgatccgaacgtgcgctccctgctgcaggtcaaggtccccgacgccaccgatgcc
gacggtctcttcgctcggttgatgggtgacgaagtcgaaccgcggcgcgaatttatccag
gacaacgcgctgagcgtcgcaaacctcgatatctga
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