Rhizobium acidisoli: CO657_21160
Help
Entry
CO657_21160 CDS
T06438
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rad
Rhizobium acidisoli
Pathway
rad03030
DNA replication
rad03410
Base excision repair
rad03420
Nucleotide excision repair
rad03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CO657_21160 (polA)
03410 Base excision repair
CO657_21160 (polA)
03420 Nucleotide excision repair
CO657_21160 (polA)
03440 Homologous recombination
CO657_21160 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rad03032
]
CO657_21160 (polA)
03400 DNA repair and recombination proteins [BR:
rad03400
]
CO657_21160 (polA)
Enzymes [BR:
rad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CO657_21160 (polA)
DNA replication proteins [BR:
rad03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CO657_21160 (polA)
DNA repair and recombination proteins [BR:
rad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CO657_21160 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CO657_21160 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
HHH
IMS_HHH
DUF7285
Transposase_20
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
QAS80424
UniProt:
A0AAE5TYU2
LinkDB
All DBs
Position
4352764..4355763
Genome browser
AA seq
999 aa
AA seq
DB search
MKKGDHLFLVDGSGFIFRAFHALPPLTRKTDGLPIGAVSGFCNMLWKLLRDARNTDVGVT
PTHLAVIFDYSAKTFRKDLYDAYKANRSAPPEELIPQFGLIREATRAFNLPCIETEGFEA
DDIIATYARQAEASGADVTIVSSDKDLMQLVSPNVHMYDSMKDKQIGIPDVIEKWGVPPE
KMIDLQAMTGDSVDNVPGIPGIGPKTAAQLLEEYGDLDTLLERATEIKQVKRRETILANI
DMARLSRDLVRLRTDVPLHLDLDALVLEPQNGPKLIGFLKTMEFTTLTRRVAEVCDCDAS
AIEPAIVNVEWGKAAHGPDLDAAEPAPVAGGIPEVSGESVPVLPRVKAKASVEGAFSPAD
LAKARAEAFATLPFDHTAYVTIRDLATLDRWIADARATGLVAFDTETTSLDAMQAELVGF
SLAIADNTADPTGTKIRAAYIPLAHKNGVGDLLGGGLADNQIPMRDALPRLKALLEDAAV
LKVAQNLKYDYLLMQRYGIETRSFDDTMLISYVLDAGTGAHGMDPLSEKFLGHTPIPYKD
VAGSGKANVTFDLVDIDRATHYAAEDADVTLRLWLVLKPRLAAAGLTSVYERLERPLLPV
LARMEARGITVDRQILSRLSGELAQGAARLEDEIYVLAGERFNIGSPKQLGDILFGKMGL
AGGSKTKTGQWSTSAQVLEDLAAAGFELPRKIVDWRQLTKLKSTYTDALPGYVHAETKRV
HTSYSLASTTTGRLSSSEPNLQNIPVRTAEGRKIRTAFISTPGHKLISADYSQIELRVLA
HVAEIPQLTKAFEDGVDIHAMTASEMFGVPVEGMPGEVRRRAKAINFGIIYGISAFGLAN
QLSIERSEAGDYIKKYFERFPGIRDYMESRKAMARDKGYVETIFGRRINYPEIRSSNASV
RAFNERAAINAPIQGSAADVIRRAMIRMEPALAEVGLGDRVRMLLQVHDELIFEVEDEDV
EKAMPIIVSVMENATMPALEMRVPLRVDARAASNWDEAH
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggcgatcacctcttcctagtcgatggttccgggttcatcttccgggcgttt
cacgcacttccgccgctgacccgcaagaccgacggcctgccgatcggcgccgtttccggt
ttctgcaacatgctgtggaagctgttgcgcgacgcgcgcaacaccgatgtcggggtgacg
ccgacgcatcttgccgtcatcttcgactattccgccaagacctttcgcaaggatctctac
gacgcctataaggccaaccgctccgccccgccggaagagctcattccccaattcggcctg
atccgcgaggcgacccgcgctttcaatctgccctgcatcgagaccgaaggttttgaggcc
gacgatatcatcgccacctatgcccgccaggccgaggcctcgggcgccgatgtcaccatc
gtctcttccgacaaggatctgatgcagctcgtcagcccgaatgtccatatgtatgacagc
atgaaggacaagcagatcggcattcccgatgtcatcgagaaatggggcgtgccgccggaa
aagatgatcgacctgcaggcgatgaccggcgattccgtcgacaatgttcccggcattccc
ggcatcggtccgaagaccgccgcccagctgctcgaggaatacggcgatctcgacacgctg
ctcgaacgcgccaccgagatcaagcaggtcaagcgccgcgaaaccattctcgccaatatc
gatatggccaggctctcgcgcgacctagtgcggctgcgcaccgatgtgccgctccacctc
gatctcgacgcgctggtgctggagccgcagaacggcccgaagctgatcggcttcctgaag
acgatggaattcacgacgctgacgcgccgcgttgccgaagtctgcgattgcgatgcgagc
gccatcgaaccggcgatcgtcaatgtcgaatggggcaaggctgcccatggccccgatctc
gatgcggccgagccggccccggttgccggcggcatccccgaggtttccggcgaatcggtg
ccggtgctgccgcgcgtaaaggccaaggcttcagtcgaaggtgccttttcgcccgccgat
ctggccaaggcgcgggccgaagcctttgcgacactgcccttcgatcatacggcctatgtc
acgatccgcgatctcgccaccctcgaccggtggatcgccgatgcgcgcgccacgggcctc
gttgctttcgacactgagaccacgtcgctggatgccatgcaggccgagcttgtcggcttc
tcgctggcgattgccgacaataccgccgaccccaccggcacgaagatccgtgccgcctat
ataccgctcgcccataagaacggcgtcggcgatctgctcggcggcggccttgccgacaac
cagatccccatgcgcgatgccctgccgcggctgaaggccttgctggaggacgctgcggtt
ctcaaggtcgcgcagaacctcaaatacgactacctgctgatgcagcgctacggcatcgag
accaggagtttcgacgacacgatgctgatctcctacgtgctcgacgccggcaccggcgcc
cacggcatggacccgctctcggagaaattcctcggccatacgccgatcccctacaaggac
gtggcaggcagcggcaaggcgaacgtcaccttcgatctcgtcgatatcgaccgcgccacc
cattatgcggccgaagatgccgacgtgacgctgcggctctggctggtgctgaagccgcgg
ctggccgcggccgggctgaccagcgtctatgaacggctggaacggccgctgctgccggtg
ctggcgcgcatggaggcgcgcggcatcaccgtcgaccggcagatcctgtcgcgcctgtcc
ggcgagctcgcccagggcgccgcgcgcctggaagacgagatctatgtgctcgccggcgag
cggttcaatatcggctcgccgaagcagctcggcgatatcctgttcggcaagatgggcctt
gccggcggcagcaagacgaaaaccgggcaatggtccacctccgcgcaggtgctcgaggat
ctggccgctgccggtttcgagctgccgcgcaagatcgtcgactggcgccagctgaccaag
ctgaaatccacctataccgacgcgcttcccggctatgtccacgccgagaccaagcgggtc
cacacctcctattcgctggcatcgacgacgacggggcgcctttcctcctccgagccgaac
ctgcagaacattccggtgcgcaccgccgaaggccgcaagatccgcaccgccttcatctcg
acgccgggccacaagctgatctccgccgactacagccagatcgaattgcgcgtgctggcc
catgtggccgagatcccgcaactgaccaaggccttcgaggatggcgtcgacattcacgcg
atgaccgcgtcggaaatgttcggcgtgccagtcgaaggcatgccgggcgaagtccgccgc
cgcgccaaggcgatcaatttcggcatcatctacggcatctcggccttcggccttgccaac
cagctgtcgatcgagcgttcggaagccggcgactacatcaagaagtatttcgagcgtttc
ccgggcatccgcgactatatggaaagccgcaaggcgatggcgcgcgacaagggttatgtc
gagacgatcttcgggcggcgaatcaactaccccgaaatccgctcttccaatgcatccgtg
cgcgccttcaacgagcgtgcggcgatcaacgcgccgatccagggctcggccgccgacgtc
atccgccgggcgatgatcaggatggagccggcgctggccgaagtcggtcttggcgatcgc
gtccgcatgctgttgcaggtgcatgacgaactcatcttcgaagtcgaggacgaggatgtc
gagaaggcaatgcccatcatcgtctcggtcatggaaaacgccaccatgccggcgctcgaa
atgcgcgtgccgctgcgcgtcgacgcgcgcgccgccagcaactgggacgaggcgcattga
DBGET
integrated database retrieval system
