Rhizobium acidisoli: CO657_23320
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Entry
CO657_23320 CDS
T06438
Name
(GenBank) methylase
KO
K26273
protein strawberry notch
Organism
rad
Rhizobium acidisoli
Brite
KEGG Orthology (KO) [BR:
rad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rad03036
]
CO657_23320
Chromosome and associated proteins [BR:
rad03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
CO657_23320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
MTS
Motif
Other DBs
NCBI-ProteinID:
QAS80945
UniProt:
A0AAE5WR37
LinkDB
All DBs
Position
pRapFH23a:complement(196300..200688)
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AA seq
1462 aa
AA seq
DB search
MNIIAHHQTVSTSPRPDIKAGAEALIVAAGRITSLLEQGRVLATGNLRQIMTEVYGGSDA
EGLWLWKQAYEATEIAQVLFLRKFHAIVSCHHSPQSTLAMLTKAVRLLPTHSRRSEESQA
LQQFSTPIPLAFVASRAAGITSADVVLEPSAGTGLLAIFAKLAHARLALNEYAAVRCSLL
AQLFPRVPVSQHDGAHIDDYLDRRIQPTVVLMNPPFSAGVHVEGRVTEAAWRHLTSAFAR
LAPGGRLVAITGASLSPESSAWRDAFVRLQGQGSVLFTAAIGGSIYARHGTTTETRLIVI
DKIPARDPSKLMTSSGTAHDLETLLTWIGGIPTRLSVTTPNSSGALRSGILGADTMRPAA
SATSHRPAVGGQAGPAATVRPIPVDGEIIELSYELRNAQPKDETNAADGIYEAYRLQSIH
IPNAKPHPDRLVESVAMASVAPPKPSYRPHLPERVVTGGDLSNAQLESVIYAGEAHSGYL
AGHWSLDASFDNLKAVASDAEHAVRFRRGWFLGDGTGAGKGRQAAGIILDNWLKGRRRHV
WISKSDKLIEDAQRDWSALGQEKLLVTPLSRFRQGKPVKLDEGILFTTFATLRTDEREGK
RSRVQQIVQWLGADFDGVIVFDEGHAMANAAGGKTERGDKAASQQGRAGLRLQRALPDAR
VVYVSATGATDVESLGYAERLGLWGSSDFPFPTRSEFIAAIEDGGVAAMEVLARDLKAMG
LYASRSLSFEGVQYEILEHELTEEQVRIYDAYAEAFQVIHNHLDAAMEASGITGKTGTLN
KNAKAAARSAFESSKQRFFNHLLTSMKTPALLKATAADLDDGHAAIVQLVSTGAALTERR
LAQIPTEEWSDLQVDVTPREYVIEYLMHSFPVQLFEEFSDADGNLSSRPVHDVDGNPVIC
REAERRRDELIETLGSLPAIPTALDQIVQHFGISKVAEITGRSRRIIRREDSSSIARYAV
QNRPGSANLDEARAFMDDERGILVFSDAGGTGRSYHADLAAKNQRLRLHNLLEAGWRADV
AIQGLGRSHRTNQKQPPRFRMIATNVKAERRFLSTIARRLDTLGAITRGQRQTGGQGMFR
SEDNLESQYARDALRQLYGLLHAGRIEGCSLDKFESITGLSLTSEEGGLKDELPPIQTFL
NRMLALTIVMQNVLFEAFEQLLAARIEGAIAAGIYDKGLETITADSMTVTDRRLIYTHPV
TGAQSHLLTIERRDRNAPMQLKDVHSMLKQDPRARLMINGKSGRPAVMVPTRSIMLDDGS
IQPRVSLIRPMDELRFEVRQLEETNWQEADEQAFAIAWDAEVAAVPEFSTSTMHIVSGLL
LPIWKLLPQDFCRVRRLQTDDGERIVGRVIAPDRLAGLCRNFGIDQTMVIAPDQAWASLV
VGSSIIGLAGDMTLRRARVMNDYRVELTGFTDGMRDWLRSIGLFPEMINWKLRFFVPVTD
QGPEILSKLMQRHRLIDIVRRS
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atgaatattatcgcgcatcatcaaactgtttccacctctccacgtcctgatatcaaagcc
ggcgctgaagcactcatagttgctgccggtcgaatcacgtcactgctggagcaaggtaga
gtcctcgctacaggtaacctgcggcagatcatgaccgaagtctacggcggcagcgacgct
gagggcctctggctctggaagcaggcctatgaggcgaccgagatcgcccaggttctcttc
ctgcgcaaattccacgcaatcgtgtcctgccaccattcgccccaatcgacgctcgcgatg
ctgacgaaggcggtccgtcttctaccgacccacagccgccgatccgaagagagccaggcc
ctgcagcagttctcgactccgatcccgcttgccttcgtcgcatctcgtgctgccggcatc
acgtccgctgacgtggtgctcgaaccgtcggctggaaccggcctgctggcgatctttgca
aaactcgcacatgctcgtctggcactcaacgaatatgcggctgtccggtgctcgctgctg
gcgcagcttttcccccgcgttccggtatcgcaacacgacggcgcgcatatcgacgattac
ctcgaccgtcgcattcagccgaccgtggtgctgatgaacccgccattttccgccggtgtt
catgtcgaaggtcgcgtcaccgaagctgcctggcggcatctcacatccgcattcgctcgc
cttgcccccggcgggcggttggtcgcgatcactggggccagcctttctccggagagttcg
gcatggcgcgacgctttcgttcgtcttcaggggcagggctcggtgctgttcaccgcggcg
atcggcggaagcatctacgcccgccatggcacaacgacggaaacgcgcctgatcgtcatc
gacaagatcccggcgcgtgatccttcgaagctgatgacgtcgagcggcactgcgcacgat
ctggaaacactgctgacctggatcggcggcattccaacgcgcttgtccgtgacgacgccg
aactctagtggtgcactccgcagcggtatcctgggcgcggacacaatgcgtccagcagca
agcgccacgtcgcatcgccccgcggtcggaggacaggcggggcctgcagcaacggtccgt
ccgatacctgtcgatggcgaaatcatcgaactttcctatgagctgcgaaacgctcagccc
aaagatgagaccaatgccgctgatggcatctacgaggcctaccggctgcaatcgatccac
atccccaatgcaaaaccgcatcccgataggttggtcgaatccgtggcgatggcatccgtc
gcgccaccaaagccgagttatcgtccacacctgccggagcgcgtcgtcaccggcggcgat
ctctccaatgcccagctcgagagcgtcatctatgctggcgaagcccattccggctatctc
gccggccattggagcctcgatgcctccttcgacaatctcaaggccgtcgcatcggatgca
gaacatgctgtccgcttccgtcgcggctggtttctcggcgacggaacaggcgccggcaag
ggtcgccaggccgccggcatcattttggacaactggctaaaaggccgcagacgccatgtc
tggatttcaaaatcggataagctgatcgaggatgcccagcgcgactggagcgcgctgggc
caagaaaagctgcttgtgacacccctgtcgcgtttccggcagggcaagccggtcaagctg
gacgaaggcatcctcttcaccacctttgccacgctgcgcactgacgagcgtgagggcaag
cgctcgcgcgtgcaacaaatcgtccagtggctcggcgccgacttcgatggtgttatcgtc
ttcgatgaaggccatgccatggcgaatgcggccggtggcaagacggagcgcggtgataaa
gcggcgtcacaacagggcagggcgggacttcgcctgcaacgcgcgcttcctgacgcccgc
gtcgtctacgtctctgcgactggcgcaacagacgtcgaatcccttggctatgccgaacgg
ctcggtctttggggcagcagcgactttcccttcccgacccgttccgagttcatcgccgcg
atcgaggatggcggtgtcgcggcgatggaagtgctggcccgcgacctcaaggcaatgggg
ctttatgcctcgcgttcgctctccttcgaaggcgtgcaatacgaaatcctcgaacacgag
ctgaccgaggaacaggtccgcatctacgacgcctatgccgaggcgttccaggtcatccac
aaccatctcgacgctgccatggaggcgtccggaataaccggcaaaactgggacgttgaac
aaaaacgccaaggcagccgcgcgctcggcctttgaaagctcgaagcagcgtttcttcaac
catcttctgacctcgatgaagacgccggccctcctcaaagcgaccgctgcagatttggac
gatggtcatgctgccatcgtccagctcgtttcgacgggagcggctctgaccgagcgccgg
ttggcgcagatcccgaccgaggaatggagcgatctgcaggtcgacgtcacgccgcgggaa
tatgtcatcgaatacctgatgcactccttcccggtgcagctcttcgaggaattttccgat
gctgatggaaatctgagttcccggccggtccatgacgtggacggcaacccagtcatttgc
cgggaggccgaacggcgtcgcgacgaactgatcgaaaccttgggcagcctgccggcgatc
ccgaccgcccttgaccagatcgtccagcatttcggcatcagcaaggtcgccgagatcacc
ggccgctcccgccgcatcattcgccgggaggacagcagctccatcgcgcgctatgccgtg
caaaaccggccgggcagcgccaatctcgatgaggcccgcgccttcatggatgacgaaagg
ggcattcttgtcttcagcgacgccggcggaaccggcagatcctaccacgcggatcttgcc
gccaaaaatcagcgcctgcgtcttcacaaccttctggaagcgggctggcgcgccgatgtg
gcgatccaggggcttgggcgcagtcatcgcaccaaccagaaacagccaccgcggtttcgg
atgatcgctaccaacgtcaaggcggagcggcgcttcctctcgacgatcgcccggcgtctc
gacacgcttggcgccatcacacgcggtcagcgccaaaccggcgggcagggcatgttccgg
tccgaggacaatctcgaatcgcaatatgctcgcgacgcgctgcggcaactctacggactg
ctgcacgccggcaggatcgaaggctgctcgctcgacaagttcgaaagcatcaccggcctg
tcgctcacctcggaggaaggtggattgaaggatgagctgccgccgatccagaccttcctc
aaccgcatgctggcactgacgatcgtcatgcagaacgtgttgttcgaagccttcgagcag
ctgctggccgctcgtatcgaaggggcgattgccgccggcatctatgacaaggggcttgag
acgatcaccgccgacagcatgacggtcaccgaccggcggctgatctatacgcatccggtc
accggcgcccaatcgcatctcttgaccatcgagcgccgggaccgcaacgcacccatgcag
cttaaggacgttcatagcatgctgaagcaggatccgcgcgccaggctgatgatcaacggc
aagtctggccgaccagcggtgatggtgccgactcgctcgatcatgctggacgacggctcc
attcaaccgcgcgtgtcgctgatccggccgatggacgagctccgcttcgaagtccgtcag
ctcgaagagacgaattggcaggaggctgatgaacaggctttcgcaattgcctgggatgcc
gaagtcgcggcagtgccggaattttcgacgtcgacaatgcatatcgtcagcggtttgttg
ctgccgatctggaaattgctgccccaggatttctgccgcgtgcggcgtctgcagacggac
gacggcgaacggatcgtcggccgtgtcatcgctcccgatcggctggccgggctttgccgc
aacttcgggatcgaccagaccatggtgatcgcgccggaccaggcctgggcatcgctggtc
gtcggatcctcgatcatcgggctcgccggcgacatgacgctgcggcgggcgcgtgtcatg
aacgactaccgcgtcgaactgactggctttaccgacggcatgcgcgactggctgcggtcg
atcggcctgttccccgagatgatcaactggaagctgcgcttcttcgtgcctgtcacagac
caagggccggagatcctgtcgaagctgatgcagcgtcatcgcctcatcgacattgtgcgc
cggtcgtga
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