KEGG   Rhizobium acidisoli: CO657_24540
Entry
CO657_24540       CDS       T06438                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
rad  Rhizobium acidisoli
Brite
KEGG Orthology (KO) [BR:rad00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rad02044]
    CO657_24540 (tssC)
Secretion system [BR:rad02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   CO657_24540 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: QAS81132
UniProt: A0AAE6C241
LinkDB
Position
pRapFH23a:complement(456280..457767)
AA seq 495 aa
MTPADATDVQVATVDLGDFTRMLRFEFRIRSDHSRDLVESAVRTLAEQALQNTSLISDDV
VATIQKMIASIDQKLSAQLNEILHHENFQRVESAWRGLHHLALNTETDETLKIRVLPVSK
VEMSRTLRKYKGVTWDQSPLFKKIYEDEYGQIGGEPYGCLIADYYFDHTPPDVELLSGLA
QIAAASHSPLISAVSPHLLQMDSWRELANPRDITKIFLTPEHAPWRAFRESENSRYVALT
LPRTLGRLPYGAKTNPVDEFAFEEDTDGGDSEKYLWTNAAYAMGVNITRSFKLYGWLSRI
RGVESGGLVEGLPVHTFRSDDGGVDLKCPTEIAISDRREAELSKNGLLPLLHRKNTDLGV
FIGAQTINKPVKYEDPDASANAELSARLPYIFATCRFAHYLKCMVRDKIGTFKERHEVEE
WLNQWIQGYVHPSPELGSEESKAQQPLSSAEVKVEEVEDNPGYYVARFYMRPHYQLEGLT
ISLRLVSRLPSARKG
NT seq 1488 nt   +upstreamnt  +downstreamnt
gtgacgcctgcagatgccacagatgtacaggtcgccaccgttgatctcggcgatttcacc
cgcatgcttcgattcgagttcaggatccgctcggaccactcccgtgacttggtagagagt
gccgtccgaacactggccgagcaggcacttcaaaacacgtcgctgatcagcgacgatgtc
gtcgcgactatccaaaaaatgattgcttcgatcgaccagaagctttctgcgcaactcaac
gagatcctccatcacgaaaatttccagcgcgtggaatcagcttggcggggcttgcatcac
cttgccctcaacaccgaaaccgatgagacgttaaagattcgcgttctcccagtttcaaag
gtggagatgtcccgaactttgcggaaatataagggtgtcacctgggatcagagtccgctt
ttcaaaaaaatctacgaagacgaatatggccaaatcggcggtgaaccctatggctgcctg
attgccgactactatttcgaccataccccaccggacgtagagttgctttcgggactcgcg
cagatcgcggcggcgagccactcaccgcttatatctgccgtctcaccacatctgctgcag
atggattcttggcgtgagcttgcgaacccgcgtgacatcacaaaaatcttcctcactccc
gaacatgctccttggcgagcgttccgcgaaagcgagaactcgcggtacgtggccctgacc
ttaccacgcacccttggccggctgccctatggggccaaaaccaacccggtcgatgaattc
gccttcgaggaggacacagacggcggcgacagcgagaaatacctttggacgaatgcagcc
tacgccatgggcgtaaatatcacgcgctcgttcaagctctatggctggctctccagaatt
cgcggcgtcgaatccggcggcctcgtcgagggcctgccggtacataccttccgcagcgac
gacggtggcgtcgacctaaaatgccccactgagatcgcgatcagcgaccgccgtgaggcc
gaactctccaaaaacggtcttctaccgctgttgcaccgcaagaacacggacctcggcgta
tttattggcgctcagactattaacaagccggtcaaatacgaagaccccgacgcgtcagcg
aacgccgaactcagtgcccggctaccctacatcttcgcaacctgccgcttcgcacattat
ttgaagtgtatggtccgggacaagattggcacgttcaaggagcgccacgaggtcgaggag
tggctcaaccaatggattcagggctacgtccacccctcgcccgagcttgggagcgaagag
agtaaggcacagcagccgctctcctcggccgaggtcaaggtggaagaggtcgaagataat
cccggatattacgttgcgagattttacatgcggccacactatcagctcgaaggcctaacc
atctctttgagattggtctcgcgcctgccatccgcccgcaagggctga

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