Rhizobium acidisoli: CO657_26700
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Entry
CO657_26700 CDS
T06438
Name
(GenBank) response regulator
Organism
rad
Rhizobium acidisoli
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
Response_reg
HATPase_c
HisKA
GAF_2
GAF
DUF5983
PA-IL
RNase_Y_N
OKR_DC_1_N
YscO-like
IFT57
ATG14
OmpH
FBF1
Motif
Other DBs
NCBI-ProteinID:
QAS81494
LinkDB
All DBs
Position
pRapFH23b:complement(221096..227395)
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AA seq
2099 aa
AA seq
DB search
MSKQTSEFSRDVVAADSLNGHDHKTMAFDDASALLEVLVAVRRGDFSVRMRSDLTGVTGK
IADALNDIIAGNQRMAQQLEHVGQVVGRDGRTSTRVRFGLSDGSWSEMEGSINGLIDDLL
WPTTAVTRTITAVAKGDLLQTVPLDVDGRALKGEFLRSADIVNTMIKQLSVFTSEVTRVA
REVGTDGKLGGQAQVPAVTGVWKDLTESVNSMASNLTAQVRNIAEVTIAVANGDLSKKIT
VDVRGEILQLKEAINTMVDQLRSFASEVTRVAREVGTEGKLGGQALVPGVAGTWKDLTDS
VNAMCGNLTAQVRNIAQVTTAVARGDLSRKITVDVSGEILELKETINTMVDQLNGFAGEV
TRVAREVGTEGRLGGQAQVPGVAGTWKDLTDNVNSMASNLTAQVRNIAEVSTAIANGDLS
KKITVTVSGEILELKETINTMVDQLNAFASEVTRVAREVGTEGRLGGQANVRGVAGTWKD
LTENVNSMGGNLTAQVRNIAEVSTAIANGDLSKKITVDVKGEILELKETINTMVDQLNAF
ASEVTRVAREVGTEGRLGGQANVRGVAGTWKDLTDSVNSMASNLTGQVRNIAEVATAVAQ
GDLSKKITVTVSGEILELKETINTMVDQLNGFAGEVTRVAREVGTEGRLGGQANVLGVAG
TWKDLTDSVNSMAGNLTAQVRNIAEVSTAIANGDLSKKITVSVSGEILELKETLNTMVDQ
LNRFASEVTRVAREVGTEGKLGGQAQVPGVAGTWKDLTENVNSMASNLTGQVRNIAEVTT
AVARGDLSRKITVDVKGEILELKNTINTMVDQLNAFAGEVTRVAREVGTEGKLGGQAQVS
GVAGTWKDLTDSVNSMAGNLTAQVRNIAEVATAIANGDLSRKITVDVRGEILLLKDTLNT
MVDQLRSFAGEVTRVAREVGTDGRLGGQAVVPGVAGTWKDLTDNVNLLAANLTTQVRNIA
EVTTAVARGDLSRKITVDVKGEILELKNTINTMVDQLNAFAGEVTRVAREVGTEGKLGGQ
AQVPGVAGTWKDLTDTVNVMAANLTEQVRGIVKVVTAVANGDLKQNLTVASKGEVAALAE
TINNMTNTLATFADQVTTVAREVGVEGRLGGQANVPGTAGTWKDLTGNVNLLAANLTTQV
RAIAEVATAVTKGDLTRSIKVDARGEVAELKDNINTMIDNLRLTTERNTEQDWLKTNLAR
FTNMLQGQRDLTLVGKLLLSELAPLVSAHQGVIYQVDADEEQPFLSLLSVYAQGVEAAHP
PRLDFGQGLVGQCASDARRILVTDLPENVVPISSGVFTTLPRSAIVLPVHFEGQVKAVIE
LASAGEFTELQLSFLDQLTTSIGIVLNSIEATMQTEGLLKQSQKLAAELQTQQRELQQTN
EQLGQKAQQLEERNVEVEAKNQEIEQARRALEEKATELALTSKYKSEFLANMSHELRTPL
NSILILGQQLGENPDGNLSGKQVEFAKTIHGAGTDLLNLISDILDLSKIESGTVSVDAEE
IFVSNLLEVMARPFRHEAENRSLSFAVEIGGDVTKSIITDSKRLQQILKNLLSNAFKFTA
QGGVTLRVALAASGWSPDHPSLRHAPSVIAFEVVDTGIGIPPEKQRIIFEAFQQADASTS
RKYGGTGLGLAISRELANLLGGEIQLRSTPGVGSTFVLYLPLTYVGAGAVAPKSLPSANV
VEFAEAAASRRAEKTIEHVADDRHQIAAGDSVLLIVEDDAHYARVLVDLARDSGFKVLVA
MRGSDALSLAQDYRPAAISLDIFLPDMLGWTVLSQLKQNPQTRHIPVQIISLDEDRQHGL
TRGAFAFMSKPTTPEGLGKALSRLKAYAQPRRKHLLLVEDNEAERLSVTALLGHDDIDIT
SVGSGSEALAALRQDPPDCVVLDLSLPDMSGFDVLEQIRDDAEIGEVPVVVFTGRELSPE
EDATLHSMARSVVVKGVESPERLLDETALFLHRVVVDLPAAKQATLQELHSSDEDLVGET
VLLVDDDARNIFALSSVLERRGMRVLTATTGSEAIDVINNEPSVAIVLMDIMMPGMDGYE
TMQVIRSEPRFRRLPILALTAKAMKGDREKCLEAGASDYLAKPVNTEQLLSALRMWLHR
NT seq
6300 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaagcagaccagtgaattttcgcgcgatgtcgttgcggcagacagcctcaatggc
catgaccacaaaaccatggcattcgatgacgccagcgcgcttctggaggtccttgttgcg
gtccggcgcggtgacttttccgtgcggatgcgatcggatctgaccggcgtcaccggcaag
atcgccgatgccctcaacgacattatcgccggcaatcagcgcatggcccagcagctggaa
catgtcggccaggtcgtcggccgggatgggcgcacgagcacgcgggtacgcttcggcctg
tccgacgggtcctggtcggagatggagggatcgatcaacggcctgatcgacgatctcctg
tggccgacgacggccgtcacccgcacgatcaccgcagtcgccaagggtgatctgctgcag
acagtgccgctcgacgtcgacggacgggctctcaagggcgagttcctgcgatcggccgat
atcgtcaacacgatgatcaaacagctgagcgtcttcacctccgaggtgacgcgcgttgcc
cgcgaggtcggcacggacggaaaactcggcggacaggcgcaggtgcctgcagtgaccggc
gtctggaaggacttgaccgaaagcgttaactcgatggcgtcgaacttgaccgcgcaggtc
cgcaacatcgccgaagtgacgatcgcggttgccaacggcgacctttccaagaagatcacc
gtcgacgtgcgcggcgaaatcctgcagctcaaggaggccatcaataccatggtcgaccag
ctgcgctccttcgcttcagaagtgacgcgtgttgcccgcgaggtcggcaccgaaggcaag
ctcggcggccaggcgctggtgccgggtgtcgccggcacttggaaggacctgaccgactcc
gtcaacgccatgtgcggcaatctgacggcccaggtgcgcaacattgcccaggtgacgacg
gcggtcgcgcgcggtgacctgtcgcgcaagatcaccgtggacgtctcgggcgaaatcctg
gaactgaaggaaaccatcaacacgatggtcgaccagctcaacggctttgccggcgaggtg
acgcgcgtggcgcgtgaagtcggcaccgaagggcggctcggcggtcaggcgcaggtgccg
ggtgtcgccggcacgtggaaggacttgaccgacaacgtcaattccatggcctcgaacctc
accgcgcaggtgcgcaacatcgccgaggtgtcgaccgccatcgccaatggcgacctgtcg
aagaagatcacggtgacggtatcgggggaaatcctcgagctgaaggagactatcaacacg
atggtcgatcagctgaatgcctttgcatcggaagtcacccgcgtcgcccgcgaagtcggc
accgagggccggctcggcggccaggccaatgtgcgcggcgtcgccggcacctggaaggat
ctgaccgagaacgtcaactcgatgggcggaaacctgacggcacaggtgcgcaacatcgcc
gaagtctcgaccgccattgccaatggcgacttgtcgaagaagatcaccgtcgacgtgaaa
ggcgaaatcctggaactgaaggaaaccatcaacacgatggtcgaccagttgaacgccttc
gcttcggaagtcacccgtgtcgcccgcgaagtcggaaccgagggccggctcggcggccag
gccaatgtgcgcggcgtcgccggcacctggaaggatctgaccgatagcgtcaattccatg
gcttccaacctgacggggcaggtgcgcaacatcgctgaagtcgccaccgccgtcgcccag
ggagacctgtcgaagaagatcaccgtcaccgtgtcgggcgagatcctcgagctgaaggag
accatcaacacgatggtcgatcagctgaacggctttgccggcgaggtgacgcgtgtggcg
cgcgaggtcggcacagaaggccggctcggtggccaggccaacgtgctcggcgtcgccggc
acctggaaggatctgaccgacagcgtcaattcgatggcgggcaatctgacggcgcaggtg
cgcaacatcgccgaggtctcgaccgcgattgccaatggcgacctgtcgaagaagatcacc
gtttcggtctcgggggaaatccttgaactcaaggaaacgctgaacaccatggtcgaccag
ctgaaccgcttcgcctccgaagtgacgcgcgtcgcgcgcgaagtcggaaccgaaggcaag
ctcggcggtcaggcgcaggtgccgggtgtcgccggcacctggaaggatctgaccgagaac
gtcaattccatggcttccaacctgacgggccaggtgcgcaacatcgccgaagtgacgacc
gccgtggcgcgcggcgacctgtcgcgcaagatcaccgtcgacgtgaagggggaaatcctc
gaactgaagaacaccatcaatacgatggtggaccagctcaacgcctttgccggtgaggtg
acgcgtgtcgcccgcgaagtcggcaccgaaggcaagctcggcggccaggcgcaggtttcc
ggcgtcgccggcacctggaaggatctgaccgacagtgtcaactcgatggccggcaatctg
acggcgcaggtgcgcaacatcgccgaggtggcgaccgcaatcgccaatggcgacctgtcg
cgcaaaatcaccgtcgacgtgcgcggcgaaatcctgctgctgaaggatacgttgaatacc
atggtcgaccagcttcgctccttcgccggtgaagtgacgcgcgtggcgcgcgaagtcggc
accgatggcaggcttggcggtcaggccgtcgttcccggcgttgccggcacctggaaggac
ctgaccgacaacgtcaacctgctcgccgccaacctcacgacccaggttcgaaacatcgcc
gaagtcacgaccgccgtggcgcgcggcgacctctcacgcaagatcaccgtcgacgtgaag
ggggaaatcctcgaactgaagaacaccatcaacaccatggtggaccagctcaacgccttt
gccggcgaagtgacgcgcgtcgcccgcgaagtcggcaccgaaggcaagcttggcggccag
gcgcaggtgcctggagtggccggtacctggaaggacctgaccgacaccgtcaacgtcatg
gctgccaacctgaccgaacaggtgcgcggcatcgtcaaggtggtgacggcggtggcgaac
ggcgacctcaagcagaacctcaccgtcgcctccaagggcgaggtggcggcgctcgccgaa
accatcaacaacatgaccaatacgcttgcgaccttcgccgatcaggtgacgacggtggct
cgcgaggtgggcgtggaaggccgtctcggcggccaggcgaatgttccgggcacggccggc
acatggaaggatctcaccggcaacgtcaacctgcttgccgccaacctgacgacgcaggtg
cgcgccattgccgaggtggcgaccgccgtcaccaagggcgacctgacgcgctcgatcaag
gtcgatgcgcgcggcgaagtcgccgagctcaaagacaatatcaacacgatgatcgacaac
ctgcgcctgacgacggagcgcaacaccgaacaggactggctgaagaccaacctggcccgc
ttcaccaacatgctgcagggccagcgcgatctgacgctggtcggcaagttgctgttgtcg
gagctggcgccgctcgtcagcgctcatcagggggtgatctaccaggtcgacgccgatgag
gaacagccgttcctgtcgcttctgtcggtctatgcgcaaggggtcgaggcggcgcatccg
ccgcggctcgatttcggccagggacttgtcggccagtgcgccagtgatgcccgccgaatc
cttgtcaccgaccttcccgagaatgtcgttccgatcagttccggcgtgttcacgaccctg
ccgcgaagcgcgatcgtgctgccggtgcatttcgagggacaggtgaaagcggtaatcgag
ctggcctccgccggcgaattcaccgagttgcagctgtccttcctcgaccagctgacgacg
tcgatcggtatcgtcctcaattcgatcgaggcgaccatgcagaccgaaggcctgctcaag
cagtcgcagaaactcgccgccgagctgcagacgcagcagcgcgagttgcagcagaccaac
gagcagctcggccagaaggcgcagcagctcgaggaacgcaacgtcgaagtcgaggcgaag
aaccaggagatcgagcaggcccggcgcgcgctggaggaaaaggccaccgagctggccctg
acatcgaagtataaatccgaattcctcgccaacatgtcgcacgagctgcgcacgcctttg
aattcgattctcattctcggccagcagctcggcgaaaaccccgacggcaatctgtcgggc
aaacaggtcgaatttgccaagacgatccacggcgccggaaccgacctcttgaacctgatc
agcgatatcctcgacctgtcgaagatcgaatccggaacggtttcggtcgatgccgaggag
attttcgtcagcaacctgctcgaggtgatggcccggccattccggcacgaggcggaaaac
cggagcctgtcgttcgcggtcgagatcggcggtgatgtcacgaagagcatcatcacggat
tcgaagcggctgcagcagatcctcaagaacctgctgtcgaacgccttcaaattcaccgcg
caaggcggtgtgacgcttcgcgtcgcgttggcagcgagcggctggtcgccggatcatccg
tcgctccggcacgcgccttcggtcatcgccttcgaagtcgtcgacaccggcatcggcatc
ccgccggaaaagcagcgcatcattttcgaggcgttccagcaggcggatgcctcgacgagc
cgcaagtatggcggcaccggtctcgggctggcgatcagccgcgaactggcaaacctcttg
ggcggcgagatccagctgcgcagtacgccgggcgtcggcagcaccttcgtcctctatttg
ccgctgacctatgtcggtgccggcgcagttgcgccgaagtcccttccgtcggccaatgtc
gtggagttcgccgaggcggcggcgagccgccgcgccgagaagaccatcgaacatgtggca
gacgatcgccaccagatcgcggccggcgattcggtgcttctcatcgtcgaggacgatgcg
cattatgcccgtgtcctggtcgatcttgcccgtgacagcggattcaaggttctggtggcg
atgcgtggcagcgatgcgctgtcactcgcgcaggactaccggccggcggcgatctcgctc
gacatcttcctgcccgatatgctcggctggacggtgcttagccagctcaagcagaatccg
cagacgcggcatatcccggtgcagatcatcagcctcgacgaggatcgccagcatgggctg
acccgtggcgccttcgcattcatgagcaagccgacgacgccagagggcctcggcaaggcg
ctgtcgcgtttgaaggcctatgcgcaaccgcgccgcaagcatctgctgctggtggaagac
aatgaggccgagcggctgagcgtcaccgcgcttctcggacatgacgacatcgacatcaca
agtgtcggttccggatcggaagcgcttgccgccctcaggcaggatccgccggattgcgtg
gtgctcgacctttcgctgcctgacatgtccggcttcgacgtcctggagcagatacgcgac
gacgccgagatcggtgaggtgccggtggtcgtcttcaccggccgagagctttccccagag
gaagatgcgacgctgcacagcatggcccgaagcgtcgtcgtgaagggcgtcgagtctccg
gaacgtcttctcgatgagacggctctgttcctgcaccgggtcgtcgtcgacctgccggcg
gcaaaacaggccaccctgcaggaactgcacagctcggatgaggatctcgtcggcgaaacc
gtgctgctcgtcgacgacgatgcccgcaatatctttgcgctgagcagcgtgctggaacgc
cggggaatgcgggtgctgacggccacgaccggcagcgaagccatcgacgtcatcaacaac
gagccttcggtggcgatcgtgctgatggatatcatgatgccgggaatggacggctacgag
acgatgcaggtcatccgttcggagccacggttccggcggctgccgatcctggcgctgacg
gccaaggcgatgaagggcgaccgggagaaatgcctggaagcgggcgcatccgattacctg
gcgaagccggtcaataccgagcagcttctgtcggcgcttcgcatgtggctgcaccgctga
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