Rhizobium acidisoli: CO657_28460
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Entry
CO657_28460 CDS
T06438
Name
(GenBank) DUF1311 domain-containing protein
Organism
rad
Rhizobium acidisoli
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Gene cluster
GFIT
Motif
Pfam:
LprI
PKD
Motif
Other DBs
NCBI-ProteinID:
QAS81794
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All DBs
Position
pRapFH23b:complement(605373..611015)
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AA seq
1880 aa
AA seq
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MAFVSRLRLLVALSGCLFSAASHAQSFDCGKAQSAIEKAICASPALIAQDTALAASYRQA
LADLNGDPTRVNDLRQQQRRWLADRNKSCVDADPVRLSACLATSYQKRLAALAAAGASPI
QKPAESAVDPAPSIAPTTQPAAAQETSAPAAVAAPQPAPVKAPPRLVSQPHLASDQLPAD
QDGSTLLTVDTPGHITIRTQSASGVALQLVDMIAGPGDRMGAAGVSDGRIDALLDKGTYK
VRVFGAKGAAGDVKLTAQAYQELEQPDAALTSPTPIHADLSDLQQRSYWIDIPDSGRVDI
EAVGRSLQDLRLWRNGTDIADLSPKMSIFELKPGLPMTRATLTGTVEAGRYLVTAYGGQK
LVWTNSDAAEPFHIRTGTQLSLAGGIAENVIGPFGSIRFEAPADLDTFRLELPQSAPAVL
RAGRTSDTATAFQSAVIDKASREPTATLSLSTDSQPSIVEISGYEGQSFQLRGLRFGTET
QFKGSVANLISLDIAGEGGDEIPATALLLRQDRGGKATIVASDLPHLGPGQAWRRRFNLR
GPTSLLFEMTQAGQIAVRTAGVALHADISPVLVGNAPRADGRNADRFDLDAGYYLLRLLP
DNNAAGIVDLTFGTPGLVPPVQPAAPARTTISFGIREAEKATRYQIITNAAPGLLTGPRA
VALPADLQLRPLALWQPADASAQPQPLPDQPISNMPAPVPQAKGAANDDANALSRPASPA
DLQIDVHVPPGGTIAAVDMHNTSVAFATSNQRVDAKGRTLTLRFPAPAAARSIVVSWQPD
AAAAQKIASPTPASPLIAGQPQFLDLAENAEKSYRLEVAEGGLYRIETLGRLQTSLRLGT
SFLPELGEASNNGDGHNALLQTYLRAGTYQIDLSVQNSSGHLGVAVTPASLPTAATLVAD
GTSRGILSGGRGAIVPIEITHAGSYQLDLYSLGEDLTARLEDAEGWPLTAPGPLSSLSQD
FTPGHYRLVILPRDVDTRFVARLRPVIDPPQLQGHGPHPLAFNQSQAFQWREPQGKGETR
VPDSWTFDLSADADISIDLTEGMIGTLFRDDKEQIARFVAAPQFTGKLKAGHYRIDLTSL
AHDDRLDYQISLNTSDLQPGEARFVNLPAELSFNVETDRVVSLGTFGRSEIKGVLKDEHG
AVLERLTGRSDDWNIALSTRLPAGSYTLALDQAAASGTAGSQSDDNSDDQEADGDDQQAG
DDQPDLGHIEVQFALPQEQPQPALAENGTASVNGASVFTFPLPGPLPANAKDRLALVAAQ
STSDLVLSVEKRDADGGWKPQAFAHGRTPFIAWPASEGDAQWRASVWTLDGGAAPIKIAA
RSIAGDMREPGDIALEPVAIDGLDLSLNVALAHAPSAGLVDLGLSADLLAGASADRPLTA
AASGLFAPQSDRLWLVSRAAGHVRVNPAQPDAEIALTLSPGDQAVIPAIPALPGKVRLWR
ADSAFGQPGLTAGRGMGVGLNSAVALSDNQDLHIWNAASDESLQMRLKPIDAAKLEPVQL
NGTLTTTVPAFSAQPVKLATGVKRLTLDLAPGIAVVSAPSASQLLNVWSGAAPLSRSIAT
STEEIWLVNLTGDAGSARVSLSPGQAVTLGNDQIKRRFFGTAGSEEIAVDAMKGDVLNVS
GGAATFIGADGRVLRGETLSVSGPGQLIVDHGAGLVALWLERGGKSPWPKPEPKSLALPQ
SVTLEGEAMAFRLNPAQPMVLDVSTDAPVIVGLEQDGHRDMQLFPTGAEFHRYLAASEAV
LTLYSTHEGPLSGSLDMTVTPVVPVNDGIGAPVVLAPGATALFGFEVKNSGAIGVGLRSD
PDLAIGRLLDAKGQALGEGVNQLKQLAPGSYLLEARAPADAPTLIVRPSVVGLSPPPAGP
PPEIINDYLQRAGLKPTGSK
NT seq
5643 nt
NT seq
+upstream
nt +downstream
nt
atggctttcgtctctcgcctgcgtttgctcgttgccctcagtggctgtcttttctcagcg
gcctcccatgcgcaatcctttgattgcggcaaggcgcagtccgccattgaaaaggcgatt
tgtgcctcccctgccttgattgctcaggacactgccttggcagcctcctatcggcaggca
ttggcggatctcaacggcgacccgacaagggtgaacgatctacgccagcaacagcgccgc
tggttggcggaccgcaataaatcctgcgtagacgccgatccggtccggctgtcggcatgc
ctggctacaagctatcaaaagcgtcttgcggcgcttgcggcggcgggcgcttctcccatc
cagaagccggcagaatccgccgtcgaccccgcgccatcaatagcaccgacgacacagcct
gcagcggcacaagagacatcggcaccggcggccgtcgcagcgcctcaacccgcgcccgta
aaagcgccgccccggctcgtgtcgcagccgcatttggcctcggatcaactgcctgcggat
caggatggcagcaccttgctgaccgtcgacacaccaggccatatcaccatccgcacgcag
agcgcctccggtgtggcgctgcagcttgtcgacatgatcgcgggccccggggaccgcatg
ggcgccgccggggtcagtgacgggcggatcgatgccctgctcgacaaaggcacctacaag
gtccgtgtattcggcgccaagggagccgccggcgacgtcaagctcaccgcgcaagcctat
caggagcttgaacagcccgacgccgctttgacctcgcccaccccgatccatgccgatctc
agcgacctgcagcaaagatcctattggatcgacatccccgattccgggcgcgtcgatatc
gaggcggtcggacgctcgctgcaggatctgcgcttgtggcgaaacggcaccgatattgcc
gatctctcgccgaaaatgtcgatcttcgaactgaagcctggcctccccatgacccgggcg
acgctgacgggaacggtcgaggccggccgctatctcgtgacggcctatggcggccagaag
cttgtctggaccaattcggacgccgcagagccattccatattcgcaccggcacgcagcta
tcgctggctggggggattgccgaaaatgtcatcggacctttcggctcgatccgtttcgag
gcgccggcagatctcgataccttccgtctggagttgccgcaatcggcgccggcggtgctc
cgggccggtcggacttccgacacggcgacggcttttcagagtgccgtgatcgataaagcc
agccgcgaaccgacagccacgctttcgctttcgacggacagccagccgagcattgtcgaa
atctcaggctatgaaggccaatctttccagcttcgggggcttcggttcggcaccgagacc
caatttaaaggctcggtggccaatctcatcagtctcgacattgccggcgaaggcggcgat
gaaatcccggcgacggccctgctgttgcgccaggaccgtggtggcaaagccacgatcgtc
gcgtccgacctgcctcatctcggcccgggccaggcttggcggcggcgtttcaatttgcgc
gggccgacgtcgctgctgttcgagatgacgcaggctggccagatcgcggtccgcaccgca
ggcgttgccctgcatgccgacatcagcccggttctggtcggcaatgctccgcgcgccgat
ggccgcaatgccgatcgtttcgacctggacgccggctattacctgctgcgcctgctgccc
gacaacaatgccgccggcatcgtcgacctcaccttcggcacgccgggcctagttccaccg
gtccaacccgccgctccggcgcgcaccaccatttccttcggcatccgggaagccgaaaag
gccacgcgctaccagatcatcaccaatgccgcccccggtctgctgacgggacctcgtgcc
gtggccttgcccgccgatctgcagctgcggccactggcgctctggcagcccgccgatgcc
tcggcacagccgcaacccctgccggatcagccgatatccaatatgccggcgcccgtgccg
caggccaaaggtgctgcgaatgacgatgcgaacgccctgtcgcggccggcatcacccgcg
gatctgcagatcgacgtccacgtgcctccaggcgggacgatcgccgccgtcgacatgcac
aatacatcggtcgcttttgccacgagcaaccagcgcgtcgacgcaaagggccggaccttg
accttgcgcttcccggctcccgccgctgcccgctcgatcgtcgtcagctggcagccggat
gctgctgcggcgcaaaagatcgcatcgccgacccccgcatccccattgattgccggccaa
ccccagtttctcgatcttgccgagaacgcggagaaatcctaccggctcgaggttgcggaa
ggggggctttaccgcatcgaaacccttggccgtttgcagacatcgctgcgccttggcacg
tcattcctgccggaactgggggaagcgtcgaacaatggcgatggccacaatgcgctgctg
caaacctatctgcgcgcgggaacctatcagatcgacctttccgtacagaattcctccggc
catcttggcgttgccgttacgccggcctcgcttccgaccgcggcaaccctggtcgccgac
ggcaccagccgaggcattctctccggcgggcgcggcgccatcgtgccgatcgagataaca
catgcgggatcttatcagcttgatctctactccctcggcgaagaccttaccgctcgcctc
gaagatgccgagggatggccgctcaccgcgccgggccccctttccagtcttagtcaggat
ttcacgccggggcattaccgcctcgtgatcctgccgcgcgacgtcgacacgcggtttgtc
gcacggctaagacccgtcatcgacccgccgcagctgcagggccacggaccgcatccgctg
gccttcaatcagagccaggcatttcagtggcgcgagcctcagggcaagggcgagacacgc
gttcccgacagctggactttcgatctttcggctgatgcggacattagcatagacctgacc
gaaggcatgatcggcactctgtttcgcgacgacaaggagcagatcgcccgatttgtcgcc
gcgccccaattcaccggtaaattgaaggccgggcattatcgcatcgacctcacgagcctc
gcccatgatgaccggctggattatcagatttccctgaacaccagcgatttgcagcccggc
gaggcgcgcttcgtcaacctgccggccgagctttccttcaatgtcgagacggaccgtgtc
gtcagcctcggcacgttcggccgcagcgagatcaagggcgtgctgaaggacgaacatggc
gccgtcctcgaacgcctgacggggcgcagcgatgattggaacattgcgctgtccacccgt
ctgccggccggatcctatacgctggctcttgatcaggcggcagcatccggcacggccggc
agccaatcggacgataattccgacgatcaggaagccgacggcgatgaccagcaggcaggc
gacgatcagcccgatctcgggcatatcgaggttcagttcgccctgccgcaggagcaaccg
cagccggcgctcgccgagaacggcaccgcctccgtcaacggcgcctccgtctttactttc
cctctgccaggccccttgccggccaatgcgaaggatcggctcgcgctggtcgcggcgcag
tccaccagcgatctggtgctctccgtcgaaaaacgagacgccgacggcggctggaagccg
caagcctttgcccatggccgcacgccctttatcgcctggcccgcttccgagggggatgca
caatggcgcgcatcggtctggaccctcgatggtggggcggcacccatcaagatcgccgcg
cgcagcatcgccggcgatatgcgggagcccggcgatatcgccttggaacccgtggccatc
gacggcctcgatctctccctgaacgttgctctcgcgcatgcgccgtcggccggcctcgtc
gacctcggccttagtgccgatctgcttgcgggcgcaagtgccgatcgcccgcttacggcc
gctgcatcggggctttttgctccgcaatcggatcgtttatggctggtctcccgtgccgcc
ggccatgtgcgggtgaaccctgcacagcccgatgcagagatcgcgctgacgctttcgccg
ggagatcaggcggtgattccagccatccctgccttgccgggtaaggttcgattgtggcgt
gcggattcggccttcggccagccgggcctcacggccggacgcggcatgggcgtcggcctc
aacagcgcggtcgccctctccgataaccaggatctgcatatctggaacgccgcaagcgat
gaaagcctgcagatgcggctcaagccgatcgatgcggccaaactcgaacctgtgcagctg
aacggcaccttgacgacgacggttccagccttcagcgcgcagccggtaaagctggcgaca
ggggtgaaacggctgaccctcgacctggcgcccgggatcgccgtcgtctccgccccctca
gcctcccaactgttgaacgtctggtcgggtgccgctcccctgtcgcgcagcatcgcgacg
tcgactgaggagatctggctcgtcaatctgacgggtgatgccggctcggcgcgggtcagc
ctgtcacccgggcaagccgttacgctcggcaacgatcagatcaagcgccggtttttcggg
acggccggatcggaagaaatcgcggttgatgccatgaaaggagatgtcctgaacgtctcc
ggcggcgcggcgacctttatcggagccgacggtcgggtcttgcgcggtgagactctttcc
gtctccggacccggtcagctgatcgtcgatcacggcgccggcctcgtggcgctgtggctg
gaacgtggcggcaagtcgccctggccgaagcccgagccaaaatccttggccctgccgcag
agcgtgacgcttgagggtgaggccatggccttccgtcttaacccggcccagccgatggtg
ctcgacgtcagcaccgacgcacccgtcatcgtcggtctggagcaggatggtcaccgcgac
atgcagctctttccgacgggagcggagttccaccgctatcttgcggcgagtgaggcggtc
ctgacgctctattccacgcatgagggccccttgtcgggcagcctggacatgacggtgaca
ccagtcgtcccggtcaatgacggcatcggagccccggtcgtgctggcaccgggcgccacg
gccctgttcggcttcgaagtcaaaaatagcggcgctatcggtgtcggcctgcgttccgat
cctgaccttgccatcggccggctgctggatgccaagggacaggcgctcggcgaaggcgtc
aatcagctcaagcagcttgccccaggctcttacctcctggaagcacgcgcaccggccgac
gcgccgacactcatcgtcaggccttcggtggttggattgtcgccaccgcccgcgggcccg
ccgcccgaaattatcaatgattatctgcagcgtgccggtttgaagcccacgggatcgaag
tga
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