KEGG   Rhizobium acidisoli: CO657_29020
Entry
CO657_29020       CDS       T06438                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
rad  Rhizobium acidisoli
Pathway
rad03030  DNA replication
rad03430  Mismatch repair
rad03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rad00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CO657_29020
   03430 Mismatch repair
    CO657_29020
   03440 Homologous recombination
    CO657_29020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rad03032]
    CO657_29020
   03400 DNA repair and recombination proteins [BR:rad03400]
    CO657_29020
Enzymes [BR:rad01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CO657_29020
DNA replication proteins [BR:rad03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CO657_29020
DNA repair and recombination proteins [BR:rad03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CO657_29020
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: QAS81934
UniProt: A0AAE5WT31
LinkDB
Position
pRapFH23c:29906..30886
AA seq 326 aa
MSVQRDSQLDMFAKPSTATARARAPSRRPPSQPAGHSDEDMARTLEESGNYRILRKLTAR
PIATARRPEFSRLGVILDTETTGLNHRSDEIIEIGAVAFTFDDDGGIGDIVGIYGGLQQP
SRPIPPEITRLTGITDAMVEGQVIDMRSLSALIEPADLIIAHNAGFDRPFCEAFSTIFAC
KAWACSVSEIDWSARGFEGTKLGYLVGQAGYFHDGHRAVDDCHALLEILDRVQGDGESPF
AELYRASQRSRIRIFAEHSPFEMKDHLKARGYRWSDGSDGRLKSWWIEVGEDDLGDELSY
LRSDIYRWRDADPPTVRLTAFDRFKL
NT seq 981 nt   +upstreamnt  +downstreamnt
atgagcgtgcagagagattcgcaactcgatatgtttgccaagccgtcaacggcgactgcc
agggcgcgcgctccatcacgccggccgccatcgcagccggccggccattccgatgaagac
atggcgcgcacgcttgaagagagcggcaactaccgcatccttcggaaactgaccgcccgg
ccgattgcgacggccagacggccggagttttcgcggcttggcgtcattctcgatacggaa
acgaccggtctcaaccaccgcagcgatgagatcatcgaaatcggcgccgtcgccttcaca
ttcgacgatgacggcgggatcggcgatatcgtcggcatctatggcggcctgcagcagccg
tcgcggccgattccgcccgaaattacccggttgaccggcattaccgatgcgatggtcgaa
ggccaggtcatcgatatgaggtcgctgagcgccctgatcgaaccggcggatctgatcatc
gcccacaatgccggtttcgaccggccgttctgcgaagccttctcgacgatcttcgcctgc
aaggcctgggcctgttcggtgtcggagatcgactggagcgcccgcggctttgagggcacc
aagctcggctatctcgtcggccaggccggttatttccatgacggccatcgcgcggtggac
gactgccacgcactgctggaaatcctcgatcgggtgcagggcgacggcgaaagcccattc
gccgagctctaccgcgccagccagcgctcgcgcatccgcatctttgccgaacacagcccg
ttcgagatgaaggaccatctgaaggcgaggggttatcgctggtcggatggaagcgacgga
cgcctgaagtcctggtggatcgaagtcggcgaagacgatctcggtgacgagctttcctat
ctgcgctcggacatctaccggtggcgagacgcggatccgccgaccgtgcggctgacggcc
ttcgatcgcttcaaactctga

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